Experiment: Furfuryl Alcohol 0.075 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0230 and Shew_0231 are separated by 183 nucleotides Shew_0231 and Shew_0232 are separated by 192 nucleotides Shew_0232 and Shew_0233 are separated by 130 nucleotides
Shew_0230: Shew_0230 - hypothetical protein (RefSeq), at 243,776 to 245,485
_0230
Shew_0231: Shew_0231 - hypothetical protein (RefSeq), at 245,669 to 246,940
_0231
Shew_0232: Shew_0232 - hypothetical protein (RefSeq), at 247,133 to 247,528
_0232
Shew_0233: Shew_0233 - hypothetical protein (RefSeq), at 247,659 to 250,001
_0233
Position (kb) 245
246
247 Strain fitness (log2 ratio) -2
-1
0
1
2 at 244.764 kb on - strand, within Shew_0230 at 244.774 kb on - strand, within Shew_0230 at 244.774 kb on - strand, within Shew_0230 at 245.030 kb on + strand, within Shew_0230 at 245.050 kb on + strand, within Shew_0230 at 245.102 kb on + strand, within Shew_0230 at 245.285 kb on + strand, within Shew_0230 at 245.290 kb on + strand, within Shew_0230 at 245.463 kb on + strand at 245.477 kb on + strand at 245.482 kb on + strand at 245.898 kb on + strand, within Shew_0231 at 245.901 kb on - strand, within Shew_0231 at 245.942 kb on - strand, within Shew_0231 at 246.016 kb on + strand, within Shew_0231 at 246.059 kb on - strand, within Shew_0231 at 246.334 kb on - strand, within Shew_0231 at 246.391 kb on - strand, within Shew_0231 at 246.690 kb on - strand, within Shew_0231 at 247.136 kb on - strand at 247.235 kb on - strand, within Shew_0232 at 247.264 kb on - strand, within Shew_0232 at 247.415 kb on - strand, within Shew_0232 at 247.415 kb on - strand, within Shew_0232 at 247.420 kb on - strand, within Shew_0232 at 247.587 kb on - strand at 247.685 kb on - strand at 247.745 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.075 vol% remove 244,764 - Shew_0230 0.58 -1.5 244,774 - Shew_0230 0.58 -1.2 244,774 - Shew_0230 0.58 -0.4 245,030 + Shew_0230 0.73 +0.1 245,050 + Shew_0230 0.75 +0.7 245,102 + Shew_0230 0.78 +1.1 245,285 + Shew_0230 0.88 -0.8 245,290 + Shew_0230 0.89 +0.1 245,463 + +0.2 245,477 + +0.7 245,482 + +0.2 245,898 + Shew_0231 0.18 +1.0 245,901 - Shew_0231 0.18 +0.3 245,942 - Shew_0231 0.21 +1.4 246,016 + Shew_0231 0.27 +0.8 246,059 - Shew_0231 0.31 +0.8 246,334 - Shew_0231 0.52 +1.1 246,391 - Shew_0231 0.57 +0.6 246,690 - Shew_0231 0.80 +2.2 247,136 - +0.2 247,235 - Shew_0232 0.26 -1.0 247,264 - Shew_0232 0.33 +0.5 247,415 - Shew_0232 0.71 -0.3 247,415 - Shew_0232 0.71 -1.9 247,420 - Shew_0232 0.72 +0.5 247,587 - +0.3 247,685 - +0.1 247,745 + +0.1
Or see this region's nucleotide sequence