Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3184

Experiment: D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins
3,316,489	+		Ga0059261_3183	0.16	+0.3
3,316,489	+		Ga0059261_3183	0.16	+0.4
3,316,489	+		Ga0059261_3183	0.16	+0.7
3,316,489	+		Ga0059261_3183	0.16	+0.5
3,316,490	-		Ga0059261_3183	0.16	+0.3
3,316,490	-		Ga0059261_3183	0.16	+1.4
3,316,490	-		Ga0059261_3183	0.16	-0.1
3,316,492	+		Ga0059261_3183	0.16	+1.1
3,316,492	+		Ga0059261_3183	0.16	+0.8
3,316,493	-		Ga0059261_3183	0.16	-0.5
3,316,493	-		Ga0059261_3183	0.16	+0.2
3,316,493	-		Ga0059261_3183	0.16	-0.2
3,316,493	-		Ga0059261_3183	0.16	-0.5
3,316,495	+		Ga0059261_3183	0.16	-0.9
3,316,495	+		Ga0059261_3183	0.16	+0.2
3,316,495	+		Ga0059261_3183	0.16	+0.5
3,316,496	-		Ga0059261_3183	0.16	+0.6
3,316,496	-		Ga0059261_3183	0.16	-2.3
3,316,496	-		Ga0059261_3183	0.16	-0.5
3,316,708	+		Ga0059261_3183	0.40	-1.0
3,316,709	-		Ga0059261_3183	0.40	-1.6
3,316,733	-		Ga0059261_3183	0.42	-0.3
3,316,906	+		Ga0059261_3183	0.61	+2.2
3,316,906	+		Ga0059261_3183	0.61	+0.4
3,316,906	+		Ga0059261_3183	0.61	+0.2
3,316,906	+		Ga0059261_3183	0.61	-0.5
3,316,907	-		Ga0059261_3183	0.61	-0.2
3,316,907	-		Ga0059261_3183	0.61	-0.5
3,316,907	-		Ga0059261_3183	0.61	+0.5
3,316,907	-		Ga0059261_3183	0.61	+1.0
3,316,907	-		Ga0059261_3183	0.61	-0.1
3,316,907	-		Ga0059261_3183	0.61	+0.6
3,316,907	-		Ga0059261_3183	0.61	+0.9
3,316,907	-		Ga0059261_3183	0.61	-0.3
3,316,915	+		Ga0059261_3183	0.62	-0.3
3,316,915	+		Ga0059261_3183	0.62	-0.9
3,316,915	+		Ga0059261_3183	0.62	+0.2
3,316,915	+		Ga0059261_3183	0.62	+0.7
3,316,916	-		Ga0059261_3183	0.62	+0.4
3,316,916	-		Ga0059261_3183	0.62	-0.8
3,316,916	-		Ga0059261_3183	0.62	+1.0
3,316,916	-		Ga0059261_3183	0.62	+1.1
3,316,916	-		Ga0059261_3183	0.62	+0.0
3,316,916	-		Ga0059261_3183	0.62	+0.9
3,317,040	-		Ga0059261_3183	0.76	+1.0
3,317,040	-		Ga0059261_3183	0.76	-0.5
3,317,040	-		Ga0059261_3183	0.76	+1.0
3,317,042	+		Ga0059261_3183	0.76	+0.2
3,317,042	+		Ga0059261_3183	0.76	+0.0
3,317,043	-		Ga0059261_3183	0.76	+0.2
3,317,043	-		Ga0059261_3183	0.76	+0.8
3,317,043	-		Ga0059261_3183	0.76	+0.1
3,317,043	-		Ga0059261_3183	0.76	-0.3
3,317,043	-		Ga0059261_3183	0.76	-2.1
3,317,043	-		Ga0059261_3183	0.76	+0.3
3,317,054	+		Ga0059261_3183	0.77	+0.2
3,317,055	+		Ga0059261_3183	0.77	+0.5
3,317,055	+		Ga0059261_3183	0.77	-0.4
3,317,056	-		Ga0059261_3183	0.77	-0.6
3,317,056	-		Ga0059261_3183	0.77	+0.3
3,317,056	-		Ga0059261_3183	0.77	-1.4
3,317,056	-		Ga0059261_3183	0.77	-3.3
3,317,056	-		Ga0059261_3183	0.77	-0.7
3,317,056	-		Ga0059261_3183	0.77	-0.9
3,317,179	+				-0.7
3,317,179	+				+0.3
3,317,180	-				-0.7
3,317,180	-				-1.8
3,317,180	-				+0.5
3,317,572	+		Ga0059261_3184	0.35	-0.1
3,317,572	+		Ga0059261_3184	0.35	+0.5
3,317,635	+		Ga0059261_3184	0.44	+0.9
3,317,635	+		Ga0059261_3184	0.44	+0.4
3,317,636	-		Ga0059261_3184	0.44	+1.2
3,317,636	-		Ga0059261_3184	0.44	-0.2
3,317,636	-		Ga0059261_3184	0.44	+0.1
3,317,636	-		Ga0059261_3184	0.44	-0.2
3,317,752	+		Ga0059261_3184	0.59	-1.4
3,317,753	-		Ga0059261_3184	0.59	+0.0
3,317,788	+		Ga0059261_3184	0.64	-0.3
3,317,788	+		Ga0059261_3184	0.64	+0.3
3,317,788	+		Ga0059261_3184	0.64	-0.2
3,317,788	+		Ga0059261_3184	0.64	+0.2
3,317,788	+		Ga0059261_3184	0.64	-2.8
3,317,789	-		Ga0059261_3184	0.64	+0.3
3,317,794	+		Ga0059261_3184	0.65	-0.7
3,317,794	+		Ga0059261_3184	0.65	+0.6
3,317,794	+		Ga0059261_3184	0.65	-0.4
3,317,795	-		Ga0059261_3184	0.65	+0.2
3,317,795	-		Ga0059261_3184	0.65	+0.8
3,317,842	+		Ga0059261_3184	0.71	+0.4
3,318,085	+				+0.6
3,318,085	+				-0.2
3,318,086	-				-0.5
3,318,086	-				-0.7
3,318,126	+				-0.3
3,318,126	+				-0.8
3,318,126	+				+0.7
3,318,127	-				+0.6
3,318,127	-				-0.0
3,318,127	-				+0.5
3,318,127	-				+0.1
3,318,127	-				+0.5
3,318,127	-				-0.7
3,318,127	-				-1.5
3,318,311	+		Ga0059261_3185	0.13	-0.6
3,318,311	+		Ga0059261_3185	0.13	+1.0
3,318,311	+		Ga0059261_3185	0.13	+0.4
3,318,312	-		Ga0059261_3185	0.13	+0.2
3,318,312	-		Ga0059261_3185	0.13	+0.4
3,318,312	-		Ga0059261_3185	0.13	+0.4
3,318,312	-		Ga0059261_3185	0.13	+1.0
3,318,347	+		Ga0059261_3185	0.15	+0.1
3,318,347	+		Ga0059261_3185	0.15	+0.4
3,318,347	+		Ga0059261_3185	0.15	+0.3
3,318,347	+		Ga0059261_3185	0.15	-0.0
3,318,348	-		Ga0059261_3185	0.15	+0.4
3,318,348	-		Ga0059261_3185	0.15	+0.3
3,318,348	-				+1.5
3,318,386	+		Ga0059261_3185	0.18	+0.4
3,318,386	+		Ga0059261_3185	0.18	+0.3
3,318,386	+		Ga0059261_3185	0.18	+1.4
3,318,386	+		Ga0059261_3185	0.18	+0.7
3,318,386	+		Ga0059261_3185	0.18	-0.3
3,318,387	-		Ga0059261_3185	0.18	+0.4
3,318,636	+		Ga0059261_3185	0.37	+0.6
3,318,636	+		Ga0059261_3185	0.37	+0.6
3,318,636	+		Ga0059261_3185	0.37	+0.3
3,318,636	+		Ga0059261_3185	0.37	+1.3
3,318,636	+		Ga0059261_3185	0.37	+0.5
3,318,636	+				-1.0
3,318,636	+		Ga0059261_3185	0.37	+0.2
3,318,636	+		Ga0059261_3185	0.37	+1.1
3,318,637	-		Ga0059261_3185	0.37	+0.7
3,318,637	-				-0.1
3,318,637	-		Ga0059261_3185	0.37	-0.5
3,318,637	-		Ga0059261_3185	0.37	+0.2
3,318,637	-		Ga0059261_3185	0.37	+0.1
3,318,637	-		Ga0059261_3185	0.37	+2.1
3,318,637	-		Ga0059261_3185	0.37	-0.9
3,318,674	-		Ga0059261_3185	0.40	+1.3
3,318,808	-		Ga0059261_3185	0.50	-0.2
3,318,899	+		Ga0059261_3185	0.57	+1.0
3,318,899	+		Ga0059261_3185	0.57	+0.9
3,318,899	+		Ga0059261_3185	0.57	+1.3
3,318,900	-		Ga0059261_3185	0.57	+0.2
3,318,900	-		Ga0059261_3185	0.57	-0.1
3,318,900	-		Ga0059261_3185	0.57	+2.0
3,318,900	-		Ga0059261_3185	0.57	+0.2
3,318,900	-		Ga0059261_3185	0.57	-0.3
3,318,921	+		Ga0059261_3185	0.59	+0.7
3,318,921	+		Ga0059261_3185	0.59	+0.3
3,318,921	+		Ga0059261_3185	0.59	+0.6
3,318,922	-		Ga0059261_3185	0.59	+0.9
3,318,922	-		Ga0059261_3185	0.59	+1.1
3,318,922	-		Ga0059261_3185	0.59	+0.4
3,318,922	-		Ga0059261_3185	0.59	-0.2
3,318,922	-		Ga0059261_3185	0.59	-0.3
3,318,922	-		Ga0059261_3185	0.59	+1.0
3,318,922	-		Ga0059261_3185	0.59	+1.0
3,318,922	-		Ga0059261_3185	0.59	-0.5
3,318,922	-		Ga0059261_3185	0.59	+0.2
3,318,922	-		Ga0059261_3185	0.59	+0.2
3,318,923	+		Ga0059261_3185	0.59	+0.7
3,318,923	+		Ga0059261_3185	0.59	+2.5
3,318,923	+		Ga0059261_3185	0.59	+1.1
3,318,923	+		Ga0059261_3185	0.59	+0.5
3,318,923	+		Ga0059261_3185	0.59	+0.2
3,318,924	-		Ga0059261_3185	0.59	+0.7
3,318,924	-		Ga0059261_3185	0.59	+0.1
3,318,924	-		Ga0059261_3185	0.59	+1.4
3,319,047	+		Ga0059261_3185	0.68	+0.7
3,319,047	+		Ga0059261_3185	0.68	-0.4
3,319,047	+		Ga0059261_3185	0.68	+0.3
3,319,047	+		Ga0059261_3185	0.68	+0.7
3,319,048	-		Ga0059261_3185	0.68	+0.3
3,319,048	-		Ga0059261_3185	0.68	+0.7
3,319,048	-		Ga0059261_3185	0.68	+0.1
3,319,048	-		Ga0059261_3185	0.68	+1.4