Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1968

Experiment: D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins
2,073,849	+				+0.4
2,073,849	+				-0.1
2,073,849	+				-0.2
2,073,849	+				+0.6
2,073,849	+				+0.2
2,073,849	+				-0.5
2,073,849	+				-0.2
2,073,849	+				-0.4
2,073,849	+				+0.2
2,073,850	-				-0.3
2,073,850	-				+0.1
2,073,850	-				+0.5
2,073,850	-				-0.3
2,073,850	-				+0.3
2,073,850	-				-0.1
2,073,850	-				-0.5
2,073,850	-				+0.3
2,073,850	-				-0.6
2,073,850	-				-0.4
2,073,851	+				+0.1
2,073,851	+				+0.3
2,073,851	+				+0.6
2,073,852	-				-0.9
2,073,852	-				+0.9
2,073,879	+				+0.2
2,073,879	+				-0.0
2,073,880	-				-1.6
2,073,880	-				-0.2
2,073,880	-				+0.7
2,073,963	+				-1.9
2,073,963	+				+1.3
2,073,963	+				+0.1
2,073,963	+				-2.4
2,073,964	-				+0.2
2,073,964	-				-0.4
2,073,964	-				+0.1
2,073,964	-				-1.3
2,073,964	-				+0.4
2,073,964	-				-1.4
2,073,964	-				+0.0
2,073,972	+				-0.3
2,073,982	+				-0.2
2,073,982	+				-0.1
2,073,982	+				+0.3
2,073,983	-				-0.0
2,073,983	-				-0.6
2,074,077	+		Ga0059261_1967	0.23	+0.1
2,074,077	+		Ga0059261_1967	0.23	-4.9
2,074,077	+		Ga0059261_1967	0.23	-0.1
2,074,078	-		Ga0059261_1967	0.23	-0.6
2,074,078	-		Ga0059261_1967	0.23	+0.5
2,074,078	-		Ga0059261_1967	0.23	-0.1
2,074,078	-		Ga0059261_1967	0.23	-0.6
2,074,078	-		Ga0059261_1967	0.23	+0.2
2,074,168	+		Ga0059261_1967	0.39	+0.4
2,074,168	+		Ga0059261_1967	0.39	-0.6
2,074,168	+		Ga0059261_1967	0.39	+0.6
2,074,203	+		Ga0059261_1967	0.46	-0.0
2,074,203	+		Ga0059261_1967	0.46	-0.5
2,074,203	+		Ga0059261_1967	0.46	-2.1
2,074,204	-		Ga0059261_1967	0.46	+0.3
2,074,204	-		Ga0059261_1967	0.46	+0.4
2,074,215	+		Ga0059261_1967	0.48	+0.3
2,074,215	+				-2.3
2,074,215	+		Ga0059261_1967	0.48	-0.2
2,074,215	+		Ga0059261_1967	0.48	-0.6
2,074,216	-		Ga0059261_1967	0.48	+0.3
2,074,216	-		Ga0059261_1967	0.48	-0.5
2,074,216	-		Ga0059261_1967	0.48	+0.1
2,074,216	-		Ga0059261_1967	0.48	-3.2
2,074,216	-		Ga0059261_1967	0.48	+0.1
2,074,216	-		Ga0059261_1967	0.48	+0.6
2,074,216	-		Ga0059261_1967	0.48	+0.0
2,074,216	-		Ga0059261_1967	0.48	+0.7
2,074,374	+		Ga0059261_1967	0.77	+0.3
2,074,374	+		Ga0059261_1967	0.77	+1.3
2,074,374	+		Ga0059261_1967	0.77	-0.7
2,074,375	-		Ga0059261_1967	0.77	-0.6
2,074,375	-		Ga0059261_1967	0.77	+0.4
2,074,375	-		Ga0059261_1967	0.77	+0.3
2,074,375	-		Ga0059261_1967	0.77	-0.1
2,074,375	-		Ga0059261_1967	0.77	+0.5
2,074,375	-		Ga0059261_1967	0.77	-0.3
2,074,375	-		Ga0059261_1967	0.77	+0.3
2,074,375	-		Ga0059261_1967	0.77	-0.1
2,074,484	+				-0.0
2,074,484	+				+0.3
2,074,484	+				+2.7
2,074,485	-				-0.2
2,074,522	+				-1.8
2,074,522	+				-3.2
2,074,522	+				+1.2
2,074,522	+				+0.4
2,074,522	+				-0.4
2,074,522	+				-0.2
2,074,522	+				+1.0
2,074,522	+				+0.7
2,074,522	+				+0.3
2,074,522	+				+1.2
2,074,522	+				-0.1
2,074,523	-				+0.4
2,074,523	-				+0.7
2,074,523	-				+0.3
2,074,523	-				-1.4
2,074,523	-				+0.2
2,074,523	-				-1.0
2,074,523	-				+0.2
2,074,523	-				+1.3
2,074,523	-				-0.2
2,074,523	-				-0.7
2,074,523	-				+1.0
2,074,523	-				-1.8
2,074,523	-				-0.1
2,074,620	+		Ga0059261_1968	0.14	+0.3
2,074,621	-		Ga0059261_1968	0.14	+0.1
2,074,621	-		Ga0059261_1968	0.14	-0.8
2,074,831	-		Ga0059261_1968	0.42	+0.8
2,074,885	+		Ga0059261_1968	0.49	-0.2
2,074,886	-		Ga0059261_1968	0.49	-1.7
2,074,886	-		Ga0059261_1968	0.49	-0.1
2,074,886	-		Ga0059261_1968	0.49	-0.2
2,074,964	-		Ga0059261_1968	0.60	+0.5
2,074,964	-		Ga0059261_1968	0.60	-0.0
2,074,965	+		Ga0059261_1968	0.60	-0.2
2,074,965	+		Ga0059261_1968	0.60	+0.1
2,074,965	+		Ga0059261_1968	0.60	-0.1
2,074,965	+				-0.1
2,074,966	-				-1.0
2,074,966	-		Ga0059261_1968	0.60	+0.2
2,074,966	-		Ga0059261_1968	0.60	+0.4
2,074,966	-		Ga0059261_1968	0.60	+0.4
2,074,966	-		Ga0059261_1968	0.60	-0.4
2,074,966	-		Ga0059261_1968	0.60	-0.6
2,074,966	-		Ga0059261_1968	0.60	+0.3
2,074,966	-		Ga0059261_1968	0.60	-2.4
2,074,966	-		Ga0059261_1968	0.60	+0.8
2,074,966	-		Ga0059261_1968	0.60	-0.0
2,074,966	-		Ga0059261_1968	0.60	+0.2
2,075,072	+		Ga0059261_1968	0.74	-0.2
2,075,102	+				+0.0
2,075,102	+		Ga0059261_1968	0.78	-0.1
2,075,102	+		Ga0059261_1968	0.78	-0.5
2,075,102	+		Ga0059261_1968	0.78	-0.2
2,075,102	+		Ga0059261_1968	0.78	+0.1
2,075,102	+				-1.1
2,075,102	+		Ga0059261_1968	0.78	-0.3
2,075,102	+		Ga0059261_1968	0.78	-1.0
2,075,102	+		Ga0059261_1968	0.78	+0.1
2,075,102	+		Ga0059261_1968	0.78	+0.1
2,075,103	-		Ga0059261_1968	0.78	-0.5
2,075,103	-		Ga0059261_1968	0.78	+0.1
2,075,103	-		Ga0059261_1968	0.78	+0.2
2,075,103	-		Ga0059261_1968	0.78	+0.7
2,075,103	-		Ga0059261_1968	0.78	+0.7
2,075,279	+				+0.3
2,075,279	+				-0.5
2,075,280	-				-0.3
2,075,343	+				+0.9
2,075,344	-				+0.1
2,075,400	+				+0.3
2,075,400	+				+2.1
2,075,400	+				-0.2
2,075,401	-				-0.9
2,075,401	-				+1.6
2,075,652	+		Ga0059261_1969	0.25	+0.5
2,075,652	+		Ga0059261_1969	0.25	+0.7
2,075,652	+		Ga0059261_1969	0.25	+0.1
2,075,653	-		Ga0059261_1969	0.25	+0.7
2,075,653	-		Ga0059261_1969	0.25	+1.5
2,075,808	+		Ga0059261_1969	0.35	-2.6
2,075,809	-		Ga0059261_1969	0.36	-0.2
2,075,811	+		Ga0059261_1969	0.36	+0.2
2,075,811	+		Ga0059261_1969	0.36	-1.2
2,075,811	+		Ga0059261_1969	0.36	+0.0
2,075,811	+		Ga0059261_1969	0.36	+0.3
2,075,811	+		Ga0059261_1969	0.36	+0.0
2,075,812	-		Ga0059261_1969	0.36	+0.8
2,075,812	-		Ga0059261_1969	0.36	+0.6
2,075,812	-		Ga0059261_1969	0.36	+0.4
2,075,812	-		Ga0059261_1969	0.36	-0.3
2,075,812	-		Ga0059261_1969	0.36	+0.1
2,075,812	-		Ga0059261_1969	0.36	-0.2
2,075,812	-		Ga0059261_1969	0.36	+0.7
2,075,812	-		Ga0059261_1969	0.36	-1.5