Experiment: D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0877 and Ga0059261_0878 are separated by 3 nucleotides Ga0059261_0878 and Ga0059261_0879 overlap by 4 nucleotides Ga0059261_0879 and Ga0059261_0880 are separated by 47 nucleotides
Ga0059261_0877: Ga0059261_0877 - Parvulin-like peptidyl-prolyl isomerase, at 918,076 to 919,428
_0877
Ga0059261_0878: Ga0059261_0878 - 4-hydroxythreonine-4-phosphate dehydrogenase, at 919,432 to 920,436
_0878
Ga0059261_0879: Ga0059261_0879 - ribosomal RNA small subunit methyltransferase A, at 920,433 to 921,251
_0879
Ga0059261_0880: Ga0059261_0880 - Tetratricopeptide repeat, at 921,299 to 921,805
_0880
Position (kb) 919
920
921 Strain fitness (log2 ratio) -2
-1
0
1
2 at 920.575 kb on + strand, within Ga0059261_0879 at 920.575 kb on + strand, within Ga0059261_0879 at 920.575 kb on + strand, within Ga0059261_0879 at 920.576 kb on - strand, within Ga0059261_0879 at 920.774 kb on + strand, within Ga0059261_0879 at 920.774 kb on + strand, within Ga0059261_0879 at 920.793 kb on + strand, within Ga0059261_0879 at 920.793 kb on + strand, within Ga0059261_0879 at 920.793 kb on + strand, within Ga0059261_0879 at 920.793 kb on + strand, within Ga0059261_0879 at 920.794 kb on - strand, within Ga0059261_0879 at 920.794 kb on - strand at 920.794 kb on - strand, within Ga0059261_0879 at 920.794 kb on - strand, within Ga0059261_0879 at 920.794 kb on - strand, within Ga0059261_0879 at 920.795 kb on + strand, within Ga0059261_0879 at 920.795 kb on + strand, within Ga0059261_0879 at 920.795 kb on + strand at 920.795 kb on + strand, within Ga0059261_0879 at 920.795 kb on + strand, within Ga0059261_0879 at 920.795 kb on + strand, within Ga0059261_0879 at 920.795 kb on + strand, within Ga0059261_0879 at 920.795 kb on + strand, within Ga0059261_0879 at 920.795 kb on + strand, within Ga0059261_0879 at 920.795 kb on + strand, within Ga0059261_0879 at 920.795 kb on + strand, within Ga0059261_0879 at 920.796 kb on - strand, within Ga0059261_0879 at 920.796 kb on - strand, within Ga0059261_0879 at 920.796 kb on - strand, within Ga0059261_0879 at 920.796 kb on - strand, within Ga0059261_0879 at 920.796 kb on - strand at 920.796 kb on - strand, within Ga0059261_0879 at 920.796 kb on - strand, within Ga0059261_0879 at 920.799 kb on - strand, within Ga0059261_0879 at 920.922 kb on + strand at 920.923 kb on - strand, within Ga0059261_0879 at 921.032 kb on + strand, within Ga0059261_0879 at 921.032 kb on + strand, within Ga0059261_0879 at 921.032 kb on + strand, within Ga0059261_0879 at 921.032 kb on + strand, within Ga0059261_0879 at 921.033 kb on - strand, within Ga0059261_0879 at 921.033 kb on - strand, within Ga0059261_0879 at 921.033 kb on - strand, within Ga0059261_0879 at 921.033 kb on - strand, within Ga0059261_0879 at 921.205 kb on + strand at 921.249 kb on + strand at 921.249 kb on + strand at 921.250 kb on - strand at 921.250 kb on - strand at 921.250 kb on - strand at 921.269 kb on - strand at 921.300 kb on + strand at 921.300 kb on + strand at 921.300 kb on + strand at 921.300 kb on + strand at 921.300 kb on + strand at 921.300 kb on + strand at 921.300 kb on + strand at 921.300 kb on + strand at 921.300 kb on + strand at 921.300 kb on + strand at 921.301 kb on - strand at 921.301 kb on - strand at 921.301 kb on - strand at 921.301 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins remove 920,575 + Ga0059261_0879 0.17 +0.8 920,575 + Ga0059261_0879 0.17 +1.4 920,575 + Ga0059261_0879 0.17 -0.7 920,576 - Ga0059261_0879 0.17 +1.2 920,774 + Ga0059261_0879 0.42 -0.5 920,774 + Ga0059261_0879 0.42 +0.5 920,793 + Ga0059261_0879 0.44 +0.2 920,793 + Ga0059261_0879 0.44 +0.2 920,793 + Ga0059261_0879 0.44 -0.1 920,793 + Ga0059261_0879 0.44 -0.1 920,794 - Ga0059261_0879 0.44 +2.1 920,794 - +1.8 920,794 - Ga0059261_0879 0.44 +0.2 920,794 - Ga0059261_0879 0.44 -0.4 920,794 - Ga0059261_0879 0.44 +2.1 920,795 + Ga0059261_0879 0.44 +0.7 920,795 + Ga0059261_0879 0.44 -0.7 920,795 + +0.6 920,795 + Ga0059261_0879 0.44 +0.8 920,795 + Ga0059261_0879 0.44 +0.5 920,795 + Ga0059261_0879 0.44 +0.4 920,795 + Ga0059261_0879 0.44 +0.6 920,795 + Ga0059261_0879 0.44 +1.1 920,795 + Ga0059261_0879 0.44 +0.3 920,795 + Ga0059261_0879 0.44 -0.6 920,795 + Ga0059261_0879 0.44 +0.2 920,796 - Ga0059261_0879 0.44 +0.8 920,796 - Ga0059261_0879 0.44 +0.2 920,796 - Ga0059261_0879 0.44 +1.8 920,796 - Ga0059261_0879 0.44 +0.4 920,796 - -0.3 920,796 - Ga0059261_0879 0.44 +0.5 920,796 - Ga0059261_0879 0.44 +0.6 920,799 - Ga0059261_0879 0.45 +0.2 920,922 + +0.0 920,923 - Ga0059261_0879 0.60 -1.4 921,032 + Ga0059261_0879 0.73 +1.0 921,032 + Ga0059261_0879 0.73 +1.1 921,032 + Ga0059261_0879 0.73 +0.3 921,032 + Ga0059261_0879 0.73 +1.6 921,033 - Ga0059261_0879 0.73 -2.1 921,033 - Ga0059261_0879 0.73 +1.2 921,033 - Ga0059261_0879 0.73 +0.8 921,033 - Ga0059261_0879 0.73 -0.9 921,205 + -1.5 921,249 + +0.2 921,249 + +0.1 921,250 - +0.9 921,250 - +0.3 921,250 - +0.4 921,269 - -0.9 921,300 + -0.5 921,300 + +0.3 921,300 + +0.1 921,300 + +0.1 921,300 + +0.2 921,300 + +0.2 921,300 + -1.2 921,300 + -1.4 921,300 + -0.2 921,300 + -0.6 921,301 - -0.3 921,301 - -0.3 921,301 - -0.1 921,301 - -0.3
Or see this region's nucleotide sequence