Experiment: D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0331 and Ga0059261_0332 are separated by 98 nucleotides Ga0059261_0332 and Ga0059261_0333 are separated by 49 nucleotides
Ga0059261_0331: Ga0059261_0331 - carboxynorspermidine dehydrogenase, at 315,506 to 316,711
_0331
Ga0059261_0332: Ga0059261_0332 - Esterase/lipase, at 316,810 to 317,802
_0332
Ga0059261_0333: Ga0059261_0333 - DNA repair photolyase, at 317,852 to 318,922
_0333
Position (kb) 316
317
318 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 316.757 kb on - strand at 316.757 kb on - strand at 316.794 kb on + strand at 316.794 kb on + strand at 316.794 kb on + strand at 316.795 kb on - strand at 316.795 kb on - strand at 316.795 kb on - strand at 316.795 kb on - strand at 316.795 kb on - strand at 316.798 kb on + strand at 316.798 kb on + strand at 316.798 kb on + strand at 316.798 kb on + strand at 316.798 kb on + strand at 316.798 kb on + strand at 316.798 kb on + strand at 316.799 kb on - strand at 316.799 kb on - strand at 316.799 kb on - strand at 316.799 kb on - strand at 316.799 kb on - strand at 316.799 kb on - strand at 316.799 kb on - strand at 316.908 kb on - strand at 316.908 kb on - strand at 317.056 kb on + strand, within Ga0059261_0332 at 317.062 kb on + strand, within Ga0059261_0332 at 317.062 kb on + strand, within Ga0059261_0332 at 317.062 kb on + strand, within Ga0059261_0332 at 317.062 kb on + strand, within Ga0059261_0332 at 317.062 kb on + strand, within Ga0059261_0332 at 317.062 kb on + strand, within Ga0059261_0332 at 317.062 kb on + strand, within Ga0059261_0332 at 317.062 kb on + strand, within Ga0059261_0332 at 317.062 kb on + strand, within Ga0059261_0332 at 317.062 kb on + strand, within Ga0059261_0332 at 317.063 kb on - strand, within Ga0059261_0332 at 317.063 kb on - strand, within Ga0059261_0332 at 317.063 kb on - strand, within Ga0059261_0332 at 317.128 kb on + strand, within Ga0059261_0332 at 317.128 kb on + strand, within Ga0059261_0332 at 317.128 kb on + strand, within Ga0059261_0332 at 317.128 kb on + strand, within Ga0059261_0332 at 317.128 kb on + strand, within Ga0059261_0332 at 317.128 kb on + strand, within Ga0059261_0332 at 317.128 kb on + strand, within Ga0059261_0332 at 317.128 kb on + strand, within Ga0059261_0332 at 317.128 kb on + strand, within Ga0059261_0332 at 317.128 kb on + strand, within Ga0059261_0332 at 317.129 kb on - strand, within Ga0059261_0332 at 317.129 kb on - strand, within Ga0059261_0332 at 317.129 kb on - strand, within Ga0059261_0332 at 317.129 kb on - strand, within Ga0059261_0332 at 317.129 kb on - strand, within Ga0059261_0332 at 317.129 kb on - strand, within Ga0059261_0332 at 317.129 kb on - strand, within Ga0059261_0332 at 317.129 kb on - strand, within Ga0059261_0332 at 317.129 kb on - strand, within Ga0059261_0332 at 317.129 kb on - strand, within Ga0059261_0332 at 317.212 kb on + strand, within Ga0059261_0332 at 317.212 kb on + strand, within Ga0059261_0332 at 317.213 kb on - strand, within Ga0059261_0332 at 317.401 kb on + strand, within Ga0059261_0332 at 317.401 kb on + strand, within Ga0059261_0332 at 317.402 kb on - strand, within Ga0059261_0332 at 317.461 kb on + strand at 317.461 kb on + strand, within Ga0059261_0332 at 317.462 kb on - strand, within Ga0059261_0332 at 317.462 kb on - strand, within Ga0059261_0332 at 317.632 kb on + strand, within Ga0059261_0332 at 317.679 kb on - strand, within Ga0059261_0332 at 317.800 kb on + strand at 317.800 kb on + strand at 317.800 kb on + strand at 317.800 kb on + strand at 317.800 kb on + strand at 317.800 kb on + strand at 317.800 kb on + strand at 317.801 kb on - strand at 317.801 kb on - strand at 317.801 kb on - strand at 317.801 kb on - strand at 317.801 kb on - strand at 317.801 kb on - strand at 317.801 kb on - strand at 317.841 kb on - strand at 317.888 kb on - strand at 318.071 kb on + strand, within Ga0059261_0333 at 318.098 kb on + strand, within Ga0059261_0333 at 318.098 kb on + strand, within Ga0059261_0333 at 318.098 kb on + strand, within Ga0059261_0333 at 318.098 kb on + strand, within Ga0059261_0333 at 318.099 kb on - strand, within Ga0059261_0333 at 318.099 kb on - strand, within Ga0059261_0333 at 318.125 kb on + strand, within Ga0059261_0333 at 318.126 kb on - strand, within Ga0059261_0333 at 318.221 kb on + strand, within Ga0059261_0333 at 318.221 kb on + strand, within Ga0059261_0333 at 318.221 kb on + strand, within Ga0059261_0333 at 318.222 kb on - strand, within Ga0059261_0333 at 318.222 kb on - strand, within Ga0059261_0333 at 318.304 kb on + strand, within Ga0059261_0333 at 318.304 kb on + strand, within Ga0059261_0333 at 318.312 kb on + strand, within Ga0059261_0333 at 318.536 kb on + strand, within Ga0059261_0333 at 318.536 kb on + strand, within Ga0059261_0333 at 318.536 kb on + strand, within Ga0059261_0333 at 318.536 kb on + strand, within Ga0059261_0333 at 318.536 kb on + strand, within Ga0059261_0333 at 318.537 kb on - strand, within Ga0059261_0333 at 318.537 kb on - strand, within Ga0059261_0333 at 318.537 kb on - strand, within Ga0059261_0333 at 318.537 kb on - strand, within Ga0059261_0333 at 318.589 kb on + strand, within Ga0059261_0333 at 318.589 kb on + strand, within Ga0059261_0333 at 318.589 kb on + strand, within Ga0059261_0333 at 318.589 kb on + strand, within Ga0059261_0333 at 318.589 kb on + strand, within Ga0059261_0333 at 318.589 kb on + strand, within Ga0059261_0333 at 318.589 kb on + strand, within Ga0059261_0333 at 318.590 kb on - strand, within Ga0059261_0333 at 318.590 kb on - strand, within Ga0059261_0333 at 318.590 kb on - strand, within Ga0059261_0333 at 318.590 kb on - strand, within Ga0059261_0333 at 318.632 kb on + strand, within Ga0059261_0333 at 318.632 kb on + strand, within Ga0059261_0333 at 318.632 kb on + strand, within Ga0059261_0333 at 318.632 kb on + strand, within Ga0059261_0333 at 318.633 kb on - strand, within Ga0059261_0333 at 318.633 kb on - strand, within Ga0059261_0333
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins remove 316,757 - +2.0 316,757 - +0.9 316,794 + +0.8 316,794 + -0.4 316,794 + +0.5 316,795 - +1.1 316,795 - +0.2 316,795 - -1.3 316,795 - -0.0 316,795 - +0.6 316,798 + +0.4 316,798 + +0.4 316,798 + -0.3 316,798 + -0.0 316,798 + -0.4 316,798 + +0.4 316,798 + +0.6 316,799 - -0.3 316,799 - +0.7 316,799 - +0.8 316,799 - +1.1 316,799 - +2.5 316,799 - +0.4 316,799 - -1.0 316,908 - +1.1 316,908 - -0.7 317,056 + Ga0059261_0332 0.25 +0.7 317,062 + Ga0059261_0332 0.25 +0.7 317,062 + Ga0059261_0332 0.25 +1.9 317,062 + Ga0059261_0332 0.25 +0.8 317,062 + Ga0059261_0332 0.25 +0.1 317,062 + Ga0059261_0332 0.25 +0.6 317,062 + Ga0059261_0332 0.25 +0.4 317,062 + Ga0059261_0332 0.25 +0.5 317,062 + Ga0059261_0332 0.25 -0.2 317,062 + Ga0059261_0332 0.25 -0.7 317,062 + Ga0059261_0332 0.25 +0.5 317,063 - Ga0059261_0332 0.25 -0.5 317,063 - Ga0059261_0332 0.25 -0.1 317,063 - Ga0059261_0332 0.25 +0.3 317,128 + Ga0059261_0332 0.32 +0.2 317,128 + Ga0059261_0332 0.32 +0.7 317,128 + Ga0059261_0332 0.32 +0.9 317,128 + Ga0059261_0332 0.32 +0.8 317,128 + Ga0059261_0332 0.32 -0.5 317,128 + Ga0059261_0332 0.32 +0.4 317,128 + Ga0059261_0332 0.32 +0.2 317,128 + Ga0059261_0332 0.32 +0.6 317,128 + Ga0059261_0332 0.32 +0.5 317,128 + Ga0059261_0332 0.32 +0.4 317,129 - Ga0059261_0332 0.32 +0.2 317,129 - Ga0059261_0332 0.32 +0.2 317,129 - Ga0059261_0332 0.32 +0.4 317,129 - Ga0059261_0332 0.32 +0.7 317,129 - Ga0059261_0332 0.32 +0.4 317,129 - Ga0059261_0332 0.32 +1.0 317,129 - Ga0059261_0332 0.32 +1.1 317,129 - Ga0059261_0332 0.32 +1.1 317,129 - Ga0059261_0332 0.32 +1.0 317,129 - Ga0059261_0332 0.32 +1.3 317,212 + Ga0059261_0332 0.40 +0.1 317,212 + Ga0059261_0332 0.40 +0.9 317,213 - Ga0059261_0332 0.41 +0.3 317,401 + Ga0059261_0332 0.60 +1.6 317,401 + Ga0059261_0332 0.60 +0.3 317,402 - Ga0059261_0332 0.60 +0.1 317,461 + -2.3 317,461 + Ga0059261_0332 0.66 +1.0 317,462 - Ga0059261_0332 0.66 +1.8 317,462 - Ga0059261_0332 0.66 +1.2 317,632 + Ga0059261_0332 0.83 +1.7 317,679 - Ga0059261_0332 0.88 -0.1 317,800 + -0.0 317,800 + -1.0 317,800 + +0.0 317,800 + -3.7 317,800 + +0.3 317,800 + +0.8 317,800 + +0.2 317,801 - +1.2 317,801 - -0.4 317,801 - +0.3 317,801 - -0.1 317,801 - -1.1 317,801 - -0.2 317,801 - -0.7 317,841 - -0.1 317,888 - +0.7 318,071 + Ga0059261_0333 0.20 +0.8 318,098 + Ga0059261_0333 0.23 +1.3 318,098 + Ga0059261_0333 0.23 -0.4 318,098 + Ga0059261_0333 0.23 -0.7 318,098 + Ga0059261_0333 0.23 -0.6 318,099 - Ga0059261_0333 0.23 +0.0 318,099 - Ga0059261_0333 0.23 -0.3 318,125 + Ga0059261_0333 0.25 -2.3 318,126 - Ga0059261_0333 0.26 +1.0 318,221 + Ga0059261_0333 0.34 -1.0 318,221 + Ga0059261_0333 0.34 -0.5 318,221 + Ga0059261_0333 0.34 +0.3 318,222 - Ga0059261_0333 0.35 -0.3 318,222 - Ga0059261_0333 0.35 +0.5 318,304 + Ga0059261_0333 0.42 -0.5 318,304 + Ga0059261_0333 0.42 +1.0 318,312 + Ga0059261_0333 0.43 +0.4 318,536 + Ga0059261_0333 0.64 -0.5 318,536 + Ga0059261_0333 0.64 +1.0 318,536 + Ga0059261_0333 0.64 +0.2 318,536 + Ga0059261_0333 0.64 +0.5 318,536 + Ga0059261_0333 0.64 -0.6 318,537 - Ga0059261_0333 0.64 -1.5 318,537 - Ga0059261_0333 0.64 -0.1 318,537 - Ga0059261_0333 0.64 -0.2 318,537 - Ga0059261_0333 0.64 +0.2 318,589 + Ga0059261_0333 0.69 +0.4 318,589 + Ga0059261_0333 0.69 +0.4 318,589 + Ga0059261_0333 0.69 +0.1 318,589 + Ga0059261_0333 0.69 +0.3 318,589 + Ga0059261_0333 0.69 +0.4 318,589 + Ga0059261_0333 0.69 +0.3 318,589 + Ga0059261_0333 0.69 +0.3 318,590 - Ga0059261_0333 0.69 +0.2 318,590 - Ga0059261_0333 0.69 +0.5 318,590 - Ga0059261_0333 0.69 +0.1 318,590 - Ga0059261_0333 0.69 +0.2 318,632 + Ga0059261_0333 0.73 -0.6 318,632 + Ga0059261_0333 0.73 -0.2 318,632 + Ga0059261_0333 0.73 +0.1 318,632 + Ga0059261_0333 0.73 +0.3 318,633 - Ga0059261_0333 0.73 -0.4 318,633 - Ga0059261_0333 0.73 +0.6
Or see this region's nucleotide sequence