Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23735

Experiment: L-tyrosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23730 and BWI76_RS23735 overlap by 4 nucleotidesBWI76_RS23735 and BWI76_RS23740 are separated by 320 nucleotides BWI76_RS23730: BWI76_RS23730 - glycerate kinase, at 4,954,064 to 4,955,239 _RS23730 BWI76_RS23735: BWI76_RS23735 - sugar diacid utilization regulator, at 4,955,236 to 4,956,393 _RS23735 BWI76_RS23740: BWI76_RS23740 - MFS transporter, at 4,956,714 to 4,958,363 _RS23740 Position (kb) 4955 4956 4957Strain fitness (log2 ratio) -3 -2 -1 0 1at 4954.401 kb on + strand, within BWI76_RS23730at 4954.409 kb on - strand, within BWI76_RS23730at 4954.420 kb on + strand, within BWI76_RS23730at 4954.568 kb on + strand, within BWI76_RS23730at 4954.568 kb on + strand, within BWI76_RS23730at 4954.669 kb on + strand, within BWI76_RS23730at 4954.677 kb on - strand, within BWI76_RS23730at 4954.677 kb on - strand, within BWI76_RS23730at 4954.839 kb on - strand, within BWI76_RS23730at 4954.900 kb on + strand, within BWI76_RS23730at 4955.375 kb on - strand, within BWI76_RS23735at 4955.987 kb on - strand, within BWI76_RS23735at 4956.149 kb on - strand, within BWI76_RS23735at 4956.233 kb on - strand, within BWI76_RS23735at 4956.341 kb on + strandat 4956.383 kb on + strandat 4956.491 kb on - strandat 4956.752 kb on - strandat 4956.855 kb on + strandat 4956.855 kb on + strandat 4956.863 kb on - strandat 4956.863 kb on - strandat 4957.057 kb on + strand, within BWI76_RS23740at 4957.198 kb on + strand, within BWI76_RS23740at 4957.208 kb on + strand, within BWI76_RS23740at 4957.315 kb on - strand, within BWI76_RS23740

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (N)
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4,954,401 + BWI76_RS23730 0.29 +0.7
4,954,409 - BWI76_RS23730 0.29 -2.0
4,954,420 + BWI76_RS23730 0.30 -0.0
4,954,568 + BWI76_RS23730 0.43 +0.2
4,954,568 + BWI76_RS23730 0.43 +0.0
4,954,669 + BWI76_RS23730 0.51 +1.1
4,954,677 - BWI76_RS23730 0.52 +0.6
4,954,677 - BWI76_RS23730 0.52 +0.4
4,954,839 - BWI76_RS23730 0.66 -1.2
4,954,900 + BWI76_RS23730 0.71 +0.3
4,955,375 - BWI76_RS23735 0.12 -1.5
4,955,987 - BWI76_RS23735 0.65 +0.5
4,956,149 - BWI76_RS23735 0.79 -0.4
4,956,233 - BWI76_RS23735 0.86 -3.4
4,956,341 + +1.7
4,956,383 + -0.6
4,956,491 - +0.7
4,956,752 - +0.0
4,956,855 + +0.0
4,956,855 + +0.4
4,956,863 - +0.9
4,956,863 - +0.9
4,957,057 + BWI76_RS23740 0.21 -0.4
4,957,198 + BWI76_RS23740 0.29 -0.7
4,957,208 + BWI76_RS23740 0.30 -0.3
4,957,315 - BWI76_RS23740 0.36 -2.5

Or see this region's nucleotide sequence