Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23630

Experiment: L-tyrosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23625 and BWI76_RS23630 are separated by 166 nucleotidesBWI76_RS23630 and BWI76_RS23635 are separated by 40 nucleotides BWI76_RS23625: BWI76_RS23625 - helix-turn-helix transcriptional regulator, at 4,926,707 to 4,929,418 _RS23625 BWI76_RS23630: BWI76_RS23630 - acetoin(diacetyl) reductase, at 4,929,585 to 4,930,364 _RS23630 BWI76_RS23635: BWI76_RS23635 - MFS transporter, at 4,930,405 to 4,931,958 _RS23635 Position (kb) 4929 4930 4931Strain fitness (log2 ratio) -3 -2 -1 0 1at 4928.587 kb on + strand, within BWI76_RS23625at 4928.777 kb on + strand, within BWI76_RS23625at 4928.786 kb on + strand, within BWI76_RS23625at 4928.833 kb on - strand, within BWI76_RS23625at 4928.838 kb on - strand, within BWI76_RS23625at 4928.839 kb on - strand, within BWI76_RS23625at 4929.058 kb on + strand, within BWI76_RS23625at 4929.166 kb on + strandat 4929.235 kb on + strandat 4929.356 kb on + strandat 4929.431 kb on + strandat 4929.439 kb on - strandat 4929.574 kb on - strandat 4929.624 kb on + strandat 4929.788 kb on + strand, within BWI76_RS23630at 4929.788 kb on + strand, within BWI76_RS23630at 4929.788 kb on + strand, within BWI76_RS23630at 4929.829 kb on + strand, within BWI76_RS23630at 4930.286 kb on - strand, within BWI76_RS23630at 4930.559 kb on + strandat 4930.597 kb on + strand, within BWI76_RS23635at 4930.700 kb on - strand, within BWI76_RS23635at 4930.714 kb on + strand, within BWI76_RS23635at 4930.715 kb on - strand, within BWI76_RS23635at 4930.805 kb on - strand, within BWI76_RS23635at 4930.880 kb on + strand, within BWI76_RS23635at 4930.982 kb on + strand, within BWI76_RS23635at 4931.009 kb on - strand, within BWI76_RS23635at 4931.093 kb on + strand, within BWI76_RS23635at 4931.106 kb on - strand, within BWI76_RS23635at 4931.156 kb on + strand, within BWI76_RS23635at 4931.169 kb on - strand, within BWI76_RS23635at 4931.204 kb on - strand, within BWI76_RS23635

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (N)
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4,928,587 + BWI76_RS23625 0.69 +0.2
4,928,777 + BWI76_RS23625 0.76 -0.6
4,928,786 + BWI76_RS23625 0.77 +1.5
4,928,833 - BWI76_RS23625 0.78 -0.8
4,928,838 - BWI76_RS23625 0.79 +0.2
4,928,839 - BWI76_RS23625 0.79 +0.5
4,929,058 + BWI76_RS23625 0.87 +0.3
4,929,166 + -1.5
4,929,235 + -2.0
4,929,356 + -1.2
4,929,431 + +1.2
4,929,439 - +0.6
4,929,574 - -0.8
4,929,624 + +0.6
4,929,788 + BWI76_RS23630 0.26 -3.0
4,929,788 + BWI76_RS23630 0.26 +1.0
4,929,788 + BWI76_RS23630 0.26 +0.4
4,929,829 + BWI76_RS23630 0.31 +0.5
4,930,286 - BWI76_RS23630 0.90 +0.5
4,930,559 + -0.8
4,930,597 + BWI76_RS23635 0.12 -0.4
4,930,700 - BWI76_RS23635 0.19 -1.2
4,930,714 + BWI76_RS23635 0.20 +0.6
4,930,715 - BWI76_RS23635 0.20 -1.9
4,930,805 - BWI76_RS23635 0.26 -0.0
4,930,880 + BWI76_RS23635 0.31 +0.5
4,930,982 + BWI76_RS23635 0.37 -0.3
4,931,009 - BWI76_RS23635 0.39 +0.3
4,931,093 + BWI76_RS23635 0.44 -3.2
4,931,106 - BWI76_RS23635 0.45 +0.0
4,931,156 + BWI76_RS23635 0.48 -0.4
4,931,169 - BWI76_RS23635 0.49 -0.2
4,931,204 - BWI76_RS23635 0.51 -2.7

Or see this region's nucleotide sequence