Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18650 and BWI76_RS18655 are separated by 46 nucleotides BWI76_RS18655 and BWI76_RS18660 are separated by 75 nucleotides BWI76_RS18660 and BWI76_RS18665 are separated by 10 nucleotides BWI76_RS18665 and BWI76_RS18670 are separated by 12 nucleotides
BWI76_RS18650: BWI76_RS18650 - fimbrial protein, at 3,866,162 to 3,866,698
_RS18650
BWI76_RS18655: BWI76_RS18655 - chaperone FimC, periplasmic, at 3,866,745 to 3,867,455
_RS18655
BWI76_RS18660: BWI76_RS18660 - hypothetical protein, at 3,867,531 to 3,870,158
_RS18660
BWI76_RS18665: BWI76_RS18665 - hypothetical protein, at 3,870,169 to 3,870,696
_RS18665
BWI76_RS18670: BWI76_RS18670 - hypothetical protein, at 3,870,709 to 3,871,212
_RS18670
Position (kb)
3867
3868
3869
3870
3871 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3866.552 kb on - strand, within BWI76_RS18650 at 3866.849 kb on + strand, within BWI76_RS18655 at 3867.285 kb on - strand, within BWI76_RS18655 at 3867.421 kb on + strand at 3867.473 kb on + strand at 3867.474 kb on + strand at 3867.512 kb on + strand at 3867.580 kb on - strand at 3867.653 kb on + strand at 3868.840 kb on + strand, within BWI76_RS18660 at 3868.850 kb on + strand, within BWI76_RS18660 at 3868.855 kb on + strand, within BWI76_RS18660 at 3869.287 kb on + strand, within BWI76_RS18660 at 3869.432 kb on + strand, within BWI76_RS18660 at 3869.555 kb on - strand, within BWI76_RS18660 at 3869.622 kb on + strand, within BWI76_RS18660 at 3869.654 kb on - strand, within BWI76_RS18660 at 3869.859 kb on - strand, within BWI76_RS18660 at 3869.908 kb on - strand at 3870.140 kb on + strand at 3870.808 kb on + strand, within BWI76_RS18670 at 3870.872 kb on + strand, within BWI76_RS18670 at 3871.055 kb on + strand, within BWI76_RS18670
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 3,866,552 - BWI76_RS18650 0.73 +0.8 3,866,849 + BWI76_RS18655 0.15 +0.4 3,867,285 - BWI76_RS18655 0.76 +0.1 3,867,421 + +1.1 3,867,473 + +1.2 3,867,474 + -0.4 3,867,512 + -1.6 3,867,580 - +0.2 3,867,653 + +1.7 3,868,840 + BWI76_RS18660 0.50 +2.1 3,868,850 + BWI76_RS18660 0.50 +2.2 3,868,855 + BWI76_RS18660 0.50 +3.1 3,869,287 + BWI76_RS18660 0.67 +0.6 3,869,432 + BWI76_RS18660 0.72 -2.1 3,869,555 - BWI76_RS18660 0.77 -1.5 3,869,622 + BWI76_RS18660 0.80 -1.0 3,869,654 - BWI76_RS18660 0.81 -0.6 3,869,859 - BWI76_RS18660 0.89 +0.5 3,869,908 - +0.3 3,870,140 + -0.2 3,870,808 + BWI76_RS18670 0.20 -1.3 3,870,872 + BWI76_RS18670 0.32 +0.1 3,871,055 + BWI76_RS18670 0.69 -0.7
Or see this region's nucleotide sequence