Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14460 and BWI76_RS14465 are separated by 329 nucleotides BWI76_RS14465 and BWI76_RS14470 are separated by 67 nucleotides BWI76_RS14470 and BWI76_RS14475 are separated by 62 nucleotides
BWI76_RS14460: BWI76_RS14460 - MurR/RpiR family transcriptional regulator, at 3,017,412 to 3,018,269
_RS14460
BWI76_RS14465: BWI76_RS14465 - transcriptional regulator, at 3,018,599 to 3,019,042
_RS14465
BWI76_RS14470: BWI76_RS14470 - L-serine ammonia-lyase, at 3,019,110 to 3,020,477
_RS14470
BWI76_RS14475: BWI76_RS14475 - serine/threonine transporter, at 3,020,540 to 3,021,823
_RS14475
Position (kb)
3019
3020
3021 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 3018.128 kb on + strand, within BWI76_RS14460 at 3018.128 kb on + strand, within BWI76_RS14460 at 3018.223 kb on + strand at 3018.286 kb on - strand at 3018.324 kb on - strand at 3018.375 kb on - strand at 3018.387 kb on - strand at 3018.395 kb on - strand at 3018.422 kb on - strand at 3018.614 kb on + strand at 3018.617 kb on - strand at 3018.617 kb on - strand at 3018.643 kb on + strand at 3018.671 kb on + strand, within BWI76_RS14465 at 3018.671 kb on + strand, within BWI76_RS14465 at 3018.726 kb on + strand, within BWI76_RS14465 at 3018.759 kb on + strand, within BWI76_RS14465 at 3018.967 kb on + strand, within BWI76_RS14465 at 3018.968 kb on + strand, within BWI76_RS14465 at 3018.970 kb on + strand, within BWI76_RS14465 at 3018.983 kb on + strand, within BWI76_RS14465 at 3018.983 kb on + strand, within BWI76_RS14465 at 3018.983 kb on + strand, within BWI76_RS14465 at 3018.991 kb on - strand, within BWI76_RS14465 at 3019.003 kb on - strand at 3019.004 kb on - strand at 3019.050 kb on + strand at 3019.218 kb on - strand at 3019.443 kb on + strand, within BWI76_RS14470 at 3019.500 kb on - strand, within BWI76_RS14470 at 3019.684 kb on + strand at 3019.759 kb on - strand, within BWI76_RS14470 at 3019.924 kb on + strand, within BWI76_RS14470 at 3019.947 kb on - strand, within BWI76_RS14470 at 3019.950 kb on + strand, within BWI76_RS14470 at 3020.024 kb on + strand, within BWI76_RS14470 at 3020.206 kb on - strand, within BWI76_RS14470 at 3020.270 kb on + strand, within BWI76_RS14470 at 3020.323 kb on + strand, within BWI76_RS14470 at 3020.334 kb on - strand at 3020.361 kb on - strand at 3020.414 kb on + strand at 3020.621 kb on + strand at 3020.834 kb on - strand, within BWI76_RS14475 at 3020.904 kb on + strand, within BWI76_RS14475 at 3020.946 kb on - strand, within BWI76_RS14475 at 3020.975 kb on + strand, within BWI76_RS14475 at 3021.074 kb on + strand, within BWI76_RS14475 at 3021.074 kb on + strand, within BWI76_RS14475 at 3021.082 kb on - strand, within BWI76_RS14475 at 3021.249 kb on - strand, within BWI76_RS14475 at 3021.257 kb on - strand, within BWI76_RS14475 at 3021.257 kb on - strand, within BWI76_RS14475 at 3021.259 kb on - strand at 3021.259 kb on - strand, within BWI76_RS14475 at 3021.333 kb on + strand, within BWI76_RS14475 at 3021.333 kb on + strand, within BWI76_RS14475 at 3021.341 kb on - strand, within BWI76_RS14475 at 3021.341 kb on - strand, within BWI76_RS14475 at 3021.341 kb on - strand, within BWI76_RS14475 at 3021.380 kb on - strand, within BWI76_RS14475
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 3,018,128 + BWI76_RS14460 0.83 -3.8 3,018,128 + BWI76_RS14460 0.83 +1.4 3,018,223 + -0.8 3,018,286 - -0.2 3,018,324 - -0.7 3,018,375 - +0.8 3,018,387 - -0.7 3,018,395 - +1.1 3,018,422 - -2.1 3,018,614 + +1.2 3,018,617 - +0.5 3,018,617 - -2.0 3,018,643 + -3.0 3,018,671 + BWI76_RS14465 0.16 -2.8 3,018,671 + BWI76_RS14465 0.16 -3.2 3,018,726 + BWI76_RS14465 0.29 -2.6 3,018,759 + BWI76_RS14465 0.36 -0.6 3,018,967 + BWI76_RS14465 0.83 +0.5 3,018,968 + BWI76_RS14465 0.83 +1.0 3,018,970 + BWI76_RS14465 0.84 -1.9 3,018,983 + BWI76_RS14465 0.86 -0.7 3,018,983 + BWI76_RS14465 0.86 +0.2 3,018,983 + BWI76_RS14465 0.86 -1.0 3,018,991 - BWI76_RS14465 0.88 +0.4 3,019,003 - -1.3 3,019,004 - +1.4 3,019,050 + +0.7 3,019,218 - +1.5 3,019,443 + BWI76_RS14470 0.24 -1.8 3,019,500 - BWI76_RS14470 0.29 +0.9 3,019,684 + +0.6 3,019,759 - BWI76_RS14470 0.47 -3.3 3,019,924 + BWI76_RS14470 0.60 +0.6 3,019,947 - BWI76_RS14470 0.61 +0.2 3,019,950 + BWI76_RS14470 0.61 -2.0 3,020,024 + BWI76_RS14470 0.67 +0.5 3,020,206 - BWI76_RS14470 0.80 -2.7 3,020,270 + BWI76_RS14470 0.85 +0.8 3,020,323 + BWI76_RS14470 0.89 +2.4 3,020,334 - +4.7 3,020,361 - -0.6 3,020,414 + -1.0 3,020,621 + +0.1 3,020,834 - BWI76_RS14475 0.23 -0.1 3,020,904 + BWI76_RS14475 0.28 -2.2 3,020,946 - BWI76_RS14475 0.32 +1.8 3,020,975 + BWI76_RS14475 0.34 -0.0 3,021,074 + BWI76_RS14475 0.42 -0.8 3,021,074 + BWI76_RS14475 0.42 +1.1 3,021,082 - BWI76_RS14475 0.42 +1.3 3,021,249 - BWI76_RS14475 0.55 -0.7 3,021,257 - BWI76_RS14475 0.56 -1.9 3,021,257 - BWI76_RS14475 0.56 +0.0 3,021,259 - -0.3 3,021,259 - BWI76_RS14475 0.56 +2.2 3,021,333 + BWI76_RS14475 0.62 -0.3 3,021,333 + BWI76_RS14475 0.62 +2.7 3,021,341 - BWI76_RS14475 0.62 -1.4 3,021,341 - BWI76_RS14475 0.62 +1.6 3,021,341 - BWI76_RS14475 0.62 -0.8 3,021,380 - BWI76_RS14475 0.65 +2.0
Or see this region's nucleotide sequence