Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13770 and BWI76_RS13775 are separated by 9 nucleotides BWI76_RS13775 and BWI76_RS13780 overlap by 4 nucleotides BWI76_RS13780 and BWI76_RS13785 overlap by 4 nucleotides BWI76_RS13785 and BWI76_RS13790 overlap by 4 nucleotides
BWI76_RS13770: BWI76_RS13770 - alkylhydroperoxidase domain protein, at 2,870,997 to 2,872,088
_RS13770
BWI76_RS13775: BWI76_RS13775 - putative FMN-dependent luciferase-like monooxygenase, at 2,872,098 to 2,873,087
_RS13775
BWI76_RS13780: BWI76_RS13780 - ABC transporter ATP-binding protein, at 2,873,084 to 2,874,688
_RS13780
BWI76_RS13785: BWI76_RS13785 - ABC transporter permease, at 2,874,685 to 2,875,536
_RS13785
BWI76_RS13790: BWI76_RS13790 - peptide ABC transporter permease, at 2,875,533 to 2,876,477
_RS13790
Position (kb)
2873
2874
2875 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2872.152 kb on + strand at 2872.166 kb on + strand at 2872.272 kb on - strand, within BWI76_RS13775 at 2872.532 kb on + strand, within BWI76_RS13775 at 2872.598 kb on - strand, within BWI76_RS13775 at 2873.141 kb on + strand at 2873.152 kb on - strand at 2873.396 kb on + strand, within BWI76_RS13780 at 2873.442 kb on + strand, within BWI76_RS13780 at 2873.948 kb on - strand, within BWI76_RS13780 at 2874.219 kb on - strand, within BWI76_RS13780 at 2874.222 kb on + strand, within BWI76_RS13780 at 2874.256 kb on + strand, within BWI76_RS13780 at 2874.256 kb on + strand, within BWI76_RS13780 at 2874.266 kb on + strand, within BWI76_RS13780 at 2874.278 kb on - strand, within BWI76_RS13780 at 2874.387 kb on - strand, within BWI76_RS13780 at 2874.987 kb on - strand, within BWI76_RS13785 at 2875.108 kb on + strand, within BWI76_RS13785 at 2875.640 kb on - strand, within BWI76_RS13790
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 2,872,152 + -0.5 2,872,166 + -2.1 2,872,272 - BWI76_RS13775 0.18 -3.1 2,872,532 + BWI76_RS13775 0.44 -2.3 2,872,598 - BWI76_RS13775 0.51 +0.5 2,873,141 + +1.1 2,873,152 - -1.3 2,873,396 + BWI76_RS13780 0.19 +0.4 2,873,442 + BWI76_RS13780 0.22 +0.1 2,873,948 - BWI76_RS13780 0.54 +1.4 2,874,219 - BWI76_RS13780 0.71 -0.3 2,874,222 + BWI76_RS13780 0.71 +0.1 2,874,256 + BWI76_RS13780 0.73 -1.5 2,874,256 + BWI76_RS13780 0.73 +1.0 2,874,266 + BWI76_RS13780 0.74 -1.0 2,874,278 - BWI76_RS13780 0.74 +0.6 2,874,387 - BWI76_RS13780 0.81 -2.1 2,874,987 - BWI76_RS13785 0.35 -2.0 2,875,108 + BWI76_RS13785 0.50 -0.6 2,875,640 - BWI76_RS13790 0.11 -0.2
Or see this region's nucleotide sequence