Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11825

Experiment: L-tyrosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11820 and BWI76_RS11825 are separated by 121 nucleotidesBWI76_RS11825 and BWI76_RS11830 are separated by 154 nucleotides BWI76_RS11820: BWI76_RS11820 - short-chain dehydrogenase/reductase SDR, at 2,485,567 to 2,486,271 _RS11820 BWI76_RS11825: BWI76_RS11825 - LysR family transcriptional regulator, at 2,486,393 to 2,487,292 _RS11825 BWI76_RS11830: BWI76_RS11830 - hypothetical protein, at 2,487,447 to 2,488,394 _RS11830 Position (kb) 2486 2487 2488Strain fitness (log2 ratio) -1 0 1at 2485.498 kb on - strandat 2486.168 kb on + strand, within BWI76_RS11820at 2486.215 kb on - strandat 2486.317 kb on + strandat 2486.328 kb on + strandat 2486.423 kb on + strandat 2486.545 kb on + strand, within BWI76_RS11825at 2486.553 kb on - strand, within BWI76_RS11825at 2486.633 kb on + strand, within BWI76_RS11825at 2486.977 kb on + strand, within BWI76_RS11825at 2487.534 kb on - strandat 2487.607 kb on - strand, within BWI76_RS11830at 2487.738 kb on - strand, within BWI76_RS11830at 2487.964 kb on + strand, within BWI76_RS11830at 2488.110 kb on + strand, within BWI76_RS11830at 2488.133 kb on + strand, within BWI76_RS11830at 2488.242 kb on + strand, within BWI76_RS11830

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (N)
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2,485,498 - +1.6
2,486,168 + BWI76_RS11820 0.85 +1.1
2,486,215 - -0.6
2,486,317 + +0.1
2,486,328 + +0.3
2,486,423 + +0.1
2,486,545 + BWI76_RS11825 0.17 +1.5
2,486,553 - BWI76_RS11825 0.18 +1.1
2,486,633 + BWI76_RS11825 0.27 +0.6
2,486,977 + BWI76_RS11825 0.65 +1.7
2,487,534 - +0.9
2,487,607 - BWI76_RS11830 0.17 +0.0
2,487,738 - BWI76_RS11830 0.31 -0.7
2,487,964 + BWI76_RS11830 0.55 +0.2
2,488,110 + BWI76_RS11830 0.70 +1.0
2,488,133 + BWI76_RS11830 0.72 +0.1
2,488,242 + BWI76_RS11830 0.84 +1.6

Or see this region's nucleotide sequence