Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11035

Experiment: L-tyrosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11030 and BWI76_RS11035 are separated by 109 nucleotidesBWI76_RS11035 and BWI76_RS11040 are separated by 35 nucleotides BWI76_RS11030: BWI76_RS11030 - MFS transporter, at 2,326,214 to 2,327,428 _RS11030 BWI76_RS11035: BWI76_RS11035 - putative LysR-family transcriptional regulator, at 2,327,538 to 2,328,473 _RS11035 BWI76_RS11040: BWI76_RS11040 - ribonuclease E, at 2,328,509 to 2,331,757 _RS11040 Position (kb) 2327 2328 2329Strain fitness (log2 ratio) -1 0 1at 2326.846 kb on - strand, within BWI76_RS11030at 2327.310 kb on - strandat 2327.590 kb on + strandat 2327.975 kb on - strand, within BWI76_RS11035at 2328.121 kb on + strand, within BWI76_RS11035at 2328.790 kb on + strandat 2329.150 kb on - strand, within BWI76_RS11040

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (N)
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2,326,846 - BWI76_RS11030 0.52 +0.5
2,327,310 - +0.1
2,327,590 + +0.2
2,327,975 - BWI76_RS11035 0.47 +1.1
2,328,121 + BWI76_RS11035 0.62 +1.4
2,328,790 + -0.2
2,329,150 - BWI76_RS11040 0.20 -0.2

Or see this region's nucleotide sequence