Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07365

Experiment: L-tyrosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07360 and BWI76_RS07365 are separated by 153 nucleotidesBWI76_RS07365 and BWI76_RS07370 are separated by 16 nucleotides BWI76_RS07360: BWI76_RS07360 - phenylalanine transporter, at 1,552,311 to 1,553,687 _RS07360 BWI76_RS07365: BWI76_RS07365 - MFS transporter, at 1,553,841 to 1,555,082 _RS07365 BWI76_RS07370: BWI76_RS07370 - xylose isomerase, at 1,555,099 to 1,556,127 _RS07370 Position (kb) 1553 1554 1555 1556Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1553.106 kb on + strand, within BWI76_RS07360at 1553.338 kb on - strand, within BWI76_RS07360at 1553.460 kb on - strand, within BWI76_RS07360at 1553.563 kb on + strandat 1553.660 kb on + strandat 1553.962 kb on + strandat 1554.123 kb on + strand, within BWI76_RS07365at 1554.185 kb on - strand, within BWI76_RS07365at 1554.190 kb on + strand, within BWI76_RS07365at 1554.190 kb on + strand, within BWI76_RS07365at 1554.190 kb on + strand, within BWI76_RS07365at 1554.190 kb on + strand, within BWI76_RS07365at 1554.198 kb on - strand, within BWI76_RS07365at 1554.248 kb on - strand, within BWI76_RS07365at 1554.251 kb on + strandat 1554.261 kb on + strand, within BWI76_RS07365at 1554.472 kb on - strand, within BWI76_RS07365at 1554.698 kb on + strand, within BWI76_RS07365at 1554.725 kb on + strand, within BWI76_RS07365at 1554.881 kb on + strand, within BWI76_RS07365at 1554.947 kb on + strand, within BWI76_RS07365at 1555.165 kb on + strandat 1555.355 kb on - strand, within BWI76_RS07370at 1555.673 kb on + strand, within BWI76_RS07370at 1555.718 kb on - strand, within BWI76_RS07370at 1555.739 kb on - strand, within BWI76_RS07370at 1555.741 kb on - strand, within BWI76_RS07370at 1555.922 kb on + strand, within BWI76_RS07370at 1555.998 kb on - strand, within BWI76_RS07370

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (N)
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1,553,106 + BWI76_RS07360 0.58 +0.1
1,553,338 - BWI76_RS07360 0.75 -0.0
1,553,460 - BWI76_RS07360 0.83 +0.7
1,553,563 + +1.3
1,553,660 + +0.6
1,553,962 + +0.5
1,554,123 + BWI76_RS07365 0.23 +0.5
1,554,185 - BWI76_RS07365 0.28 +3.1
1,554,190 + BWI76_RS07365 0.28 -3.1
1,554,190 + BWI76_RS07365 0.28 -0.4
1,554,190 + BWI76_RS07365 0.28 -0.4
1,554,190 + BWI76_RS07365 0.28 -1.2
1,554,198 - BWI76_RS07365 0.29 -1.4
1,554,248 - BWI76_RS07365 0.33 -2.2
1,554,251 + -0.3
1,554,261 + BWI76_RS07365 0.34 +0.8
1,554,472 - BWI76_RS07365 0.51 -2.3
1,554,698 + BWI76_RS07365 0.69 -1.3
1,554,725 + BWI76_RS07365 0.71 -1.5
1,554,881 + BWI76_RS07365 0.84 +0.2
1,554,947 + BWI76_RS07365 0.89 +0.1
1,555,165 + +0.8
1,555,355 - BWI76_RS07370 0.25 +0.4
1,555,673 + BWI76_RS07370 0.56 -1.4
1,555,718 - BWI76_RS07370 0.60 -0.2
1,555,739 - BWI76_RS07370 0.62 -3.1
1,555,741 - BWI76_RS07370 0.62 -0.2
1,555,922 + BWI76_RS07370 0.80 +0.2
1,555,998 - BWI76_RS07370 0.87 -2.2

Or see this region's nucleotide sequence