Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00940 and BWI76_RS00945 are separated by 118 nucleotides BWI76_RS00945 and BWI76_RS00950 are separated by 23 nucleotides BWI76_RS00950 and BWI76_RS00955 are separated by 349 nucleotides BWI76_RS00955 and BWI76_RS00960 are separated by 139 nucleotides
BWI76_RS00940: BWI76_RS00940 - transcriptional regulator HdfR, at 191,977 to 192,798
_RS00940
BWI76_RS00945: BWI76_RS00945 - hypothetical protein, at 192,917 to 193,255
_RS00945
BWI76_RS00950: BWI76_RS00950 - ATP-dependent protease, at 193,279 to 194,799
_RS00950
BWI76_RS00955: BWI76_RS00955 - IlvGMEDA operon leader peptide, at 195,149 to 195,247
_RS00955
BWI76_RS00960: BWI76_RS00960 - acetolactate synthase 2 catalytic subunit, at 195,387 to 197,033
_RS00960
Position (kb) 193
194
195 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 192.413 kb on + strand, within BWI76_RS00940 at 192.461 kb on + strand, within BWI76_RS00940 at 192.461 kb on + strand, within BWI76_RS00940 at 192.620 kb on + strand, within BWI76_RS00940 at 192.773 kb on - strand at 192.853 kb on + strand at 192.863 kb on - strand at 192.866 kb on + strand at 192.928 kb on - strand at 193.018 kb on + strand, within BWI76_RS00945 at 193.602 kb on - strand, within BWI76_RS00950 at 193.745 kb on - strand, within BWI76_RS00950 at 193.833 kb on - strand, within BWI76_RS00950 at 193.836 kb on + strand, within BWI76_RS00950 at 193.883 kb on + strand, within BWI76_RS00950 at 194.163 kb on + strand, within BWI76_RS00950 at 194.286 kb on - strand, within BWI76_RS00950 at 194.428 kb on + strand, within BWI76_RS00950 at 194.517 kb on + strand, within BWI76_RS00950 at 194.525 kb on - strand, within BWI76_RS00950 at 194.656 kb on - strand at 194.699 kb on - strand at 194.748 kb on + strand at 194.769 kb on - strand at 194.784 kb on - strand at 194.948 kb on + strand at 195.501 kb on + strand at 195.528 kb on - strand at 195.528 kb on - strand at 195.565 kb on - strand, within BWI76_RS00960 at 195.595 kb on + strand, within BWI76_RS00960 at 195.642 kb on - strand at 195.652 kb on - strand, within BWI76_RS00960
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 192,413 + BWI76_RS00940 0.53 -0.7 192,461 + BWI76_RS00940 0.59 -3.3 192,461 + BWI76_RS00940 0.59 +0.8 192,620 + BWI76_RS00940 0.78 +0.6 192,773 - -0.7 192,853 + -0.6 192,863 - -0.0 192,866 + -1.7 192,928 - +1.8 193,018 + BWI76_RS00945 0.30 -3.2 193,602 - BWI76_RS00950 0.21 +0.4 193,745 - BWI76_RS00950 0.31 +3.1 193,833 - BWI76_RS00950 0.36 +2.5 193,836 + BWI76_RS00950 0.37 -0.2 193,883 + BWI76_RS00950 0.40 +1.2 194,163 + BWI76_RS00950 0.58 -0.2 194,286 - BWI76_RS00950 0.66 -0.1 194,428 + BWI76_RS00950 0.76 -1.1 194,517 + BWI76_RS00950 0.81 -0.2 194,525 - BWI76_RS00950 0.82 +1.2 194,656 - +0.5 194,699 - -0.1 194,748 + +0.9 194,769 - +0.1 194,784 - -0.3 194,948 + +0.1 195,501 + +0.4 195,528 - +0.0 195,528 - -0.5 195,565 - BWI76_RS00960 0.11 +1.0 195,595 + BWI76_RS00960 0.13 +0.8 195,642 - +0.4 195,652 - BWI76_RS00960 0.16 +0.2
Or see this region's nucleotide sequence