Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3724

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
4,275,583	+		Rru_A3723	0.81	+1.3
4,275,583	+		Rru_A3723	0.81	-0.0
4,275,583	+		Rru_A3723	0.81	-0.0
4,275,583	+		Rru_A3723	0.81	-1.0
4,275,583	+		Rru_A3723	0.81	-1.0
4,275,584	-		Rru_A3723	0.81	-0.0
4,275,584	-		Rru_A3723	0.81	-0.0
4,275,584	-		Rru_A3723	0.81	+1.2
4,275,584	-		Rru_A3723	0.81	-0.0
4,275,584	-		Rru_A3723	0.81	+0.7
4,275,584	-		Rru_A3723	0.81	-0.2
4,275,634	+		Rru_A3723	0.84	-0.0
4,275,635	-		Rru_A3723	0.84	-0.0
4,275,745	+		Rru_A3723	0.89	+1.6
4,275,745	+		Rru_A3723	0.89	+1.2
4,275,745	+		Rru_A3723	0.89	+1.4
4,275,746	-		Rru_A3723	0.89	+2.0
4,275,746	-		Rru_A3723	0.89	-0.0
4,275,950	-				+1.5
4,276,216	-				+1.9
4,276,216	-				-0.0
4,276,252	-				+0.2
4,276,434	+				-1.6
4,276,434	+				-0.8
4,276,435	-				+1.4
4,276,435	-				-0.0
4,276,435	-				-0.0
4,276,435	-				+1.6
4,276,951	-		Rru_A3724	0.72	+1.1
4,276,951	-		Rru_A3724	0.72	-0.0
4,277,005	+		Rru_A3724	0.79	+0.6
4,277,005	+		Rru_A3724	0.79	+1.2
4,277,006	-		Rru_A3724	0.79	+0.2
4,277,006	-		Rru_A3724	0.79	+0.7
4,277,006	-		Rru_A3724	0.79	+1.3
4,277,150	-				-0.0
4,277,150	-				-0.0
4,277,220	-				-0.0
4,277,306	-		Rru_A3725	0.20	-1.0
4,277,306	-		Rru_A3725	0.20	+2.0
4,277,360	-		Rru_A3725	0.27	+1.0
4,277,801	+		Rru_A3725	0.87	+3.0
4,277,801	+		Rru_A3725	0.87	+2.5
4,277,802	-		Rru_A3725	0.87	-0.0
4,277,802	-		Rru_A3725	0.87	-0.0
4,277,879	+				-0.0
4,277,880	-				-0.0
4,277,880	-				+1.0
4,277,957	-				-0.0
4,277,957	-				+0.7
4,278,046	+		Rru_A3726	0.17	-0.0
4,278,047	-		Rru_A3726	0.17	+1.2