Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3714
Experiment: Succinic Acid; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Succinic Acid; Light intensity 9 uM |
---|---|---|---|---|---|
remove | |||||
4,263,134 | + | +1.8 | |||
4,263,537 | + | Rru_A3713 | 0.46 | -1.3 | |
4,263,537 | + | Rru_A3713 | 0.46 | +1.1 | |
4,263,538 | - | Rru_A3713 | 0.46 | +0.2 | |
4,263,538 | - | Rru_A3713 | 0.46 | +0.6 | |
4,263,538 | - | Rru_A3713 | 0.46 | +0.5 | |
4,263,538 | - | Rru_A3713 | 0.46 | -0.0 | |
4,263,573 | + | Rru_A3713 | 0.52 | +0.6 | |
4,263,574 | - | Rru_A3713 | 0.52 | +0.9 | |
4,263,574 | - | Rru_A3713 | 0.52 | -1.8 | |
4,263,574 | - | Rru_A3713 | 0.52 | +1.3 | |
4,263,574 | - | Rru_A3713 | 0.52 | -0.0 | |
4,263,578 | + | Rru_A3713 | 0.52 | -0.0 | |
4,263,578 | + | Rru_A3713 | 0.52 | -0.0 | |
4,263,579 | - | Rru_A3713 | 0.52 | -1.0 | |
4,263,579 | - | Rru_A3713 | 0.52 | -0.0 | |
4,264,195 | + | Rru_A3714 | 0.34 | -0.2 | |
4,264,618 | - | -0.0 | |||
4,264,677 | - | +0.5 | |||
4,264,905 | - | Rru_A3715 | 0.18 | -0.1 | |
4,265,182 | + | Rru_A3715 | 0.31 | +0.4 | |
4,265,182 | + | Rru_A3715 | 0.31 | +2.2 | |
4,265,182 | + | Rru_A3715 | 0.31 | +1.0 | |
4,265,182 | + | Rru_A3715 | 0.31 | +0.6 | |
4,265,182 | + | Rru_A3715 | 0.31 | +1.0 | |
4,265,183 | - | Rru_A3715 | 0.31 | +1.3 | |
4,265,183 | - | Rru_A3715 | 0.31 | +1.4 | |
4,265,183 | - | Rru_A3715 | 0.31 | +0.4 | |
4,265,183 | - | Rru_A3715 | 0.31 | +0.7 |
Or see this region's nucleotide sequence