Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3685

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
4,231,850	+		Rru_A3684	0.51	-0.0
4,231,851	-		Rru_A3684	0.51	+0.2
4,231,851	-		Rru_A3684	0.51	-0.1
4,231,918	+		Rru_A3684	0.55	-0.0
4,231,919	-		Rru_A3684	0.55	+0.8
4,232,155	+		Rru_A3684	0.70	+0.2
4,232,682	+				-0.0
4,232,684	+				-0.0
4,232,684	+				+1.1
4,232,685	-				+1.6
4,232,685	-				-0.0
4,232,685	-				+1.7
4,232,785	-		Rru_A3685	0.18	+1.4
4,232,785	-		Rru_A3685	0.18	-1.0
4,232,785	-		Rru_A3685	0.18	-0.0
4,232,785	-		Rru_A3685	0.18	+0.6
4,232,785	-		Rru_A3685	0.18	-1.8
4,232,785	-		Rru_A3685	0.18	-0.0
4,232,915	+		Rru_A3685	0.42	-0.0
4,233,001	+		Rru_A3685	0.59	+0.7
4,233,001	+		Rru_A3685	0.59	+0.7
4,233,001	+		Rru_A3685	0.59	+0.8
4,233,002	-		Rru_A3685	0.59	+0.7
4,233,002	-		Rru_A3685	0.59	+0.2
4,233,004	-		Rru_A3685	0.59	-0.0
4,233,117	-		Rru_A3685	0.81	-0.0
4,233,133	+		Rru_A3685	0.84	-0.0
4,233,133	+		Rru_A3685	0.84	+0.5
4,233,140	+		Rru_A3685	0.85	+1.6
4,233,140	+		Rru_A3685	0.85	-0.0
4,233,141	-		Rru_A3685	0.85	+0.8
4,233,145	+		Rru_A3685	0.86	-1.0
4,233,209	+				-0.0
4,233,210	-				+2.6
4,233,210	-				-0.0
4,233,464	+		Rru_A3686	0.13	+1.2
4,233,464	+		Rru_A3686	0.13	+1.4
4,233,465	-		Rru_A3686	0.13	-0.0
4,233,465	-		Rru_A3686	0.13	+0.9
4,233,465	-		Rru_A3686	0.13	+0.3
4,233,590	+		Rru_A3686	0.24	+1.2
4,233,590	+		Rru_A3686	0.24	-1.0
4,233,591	-		Rru_A3686	0.24	-0.0
4,233,591	-		Rru_A3686	0.24	+1.8
4,233,591	-		Rru_A3686	0.24	+1.2
4,233,591	-		Rru_A3686	0.24	+0.7
4,233,591	-		Rru_A3686	0.24	+2.0
4,233,596	+		Rru_A3686	0.25	+1.5
4,233,596	+		Rru_A3686	0.25	+1.6
4,233,596	+		Rru_A3686	0.25	+0.5
4,233,597	-		Rru_A3686	0.25	+0.1
4,233,597	-		Rru_A3686	0.25	+1.1
4,233,597	-		Rru_A3686	0.25	+1.5
4,233,597	-		Rru_A3686	0.25	-0.0
4,233,665	+		Rru_A3686	0.31	-0.8
4,233,971	+		Rru_A3686	0.58	-0.0
4,233,971	+		Rru_A3686	0.58	+1.4
4,233,971	+		Rru_A3686	0.58	+1.5
4,234,178	+		Rru_A3686	0.77	+1.2
4,234,178	+		Rru_A3686	0.77	+1.1
4,234,178	+		Rru_A3686	0.77	-0.0
4,234,178	+		Rru_A3686	0.77	+1.6
4,234,178	+		Rru_A3686	0.77	+1.3
4,234,178	+		Rru_A3686	0.77	-0.0
4,234,178	+		Rru_A3686	0.77	+1.5
4,234,179	-		Rru_A3686	0.77	-0.0
4,234,179	-		Rru_A3686	0.77	+1.0
4,234,179	-		Rru_A3686	0.77	+1.0
4,234,179	-		Rru_A3686	0.77	+1.4
4,234,202	+		Rru_A3686	0.79	+1.1
4,234,202	+		Rru_A3686	0.79	-0.0
4,234,202	+		Rru_A3686	0.79	-0.0
4,234,202	+		Rru_A3686	0.79	+0.6
4,234,203	-		Rru_A3686	0.79	-0.0
4,234,216	+		Rru_A3686	0.80	+1.4