Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3589

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
4,131,560	-				+1.5
4,131,710	+				+0.9
4,131,710	+				+1.0
4,131,711	-				+2.2
4,131,711	-				+1.7
4,131,905	+		Rru_A3588	0.25	+0.9
4,131,905	+		Rru_A3588	0.25	+0.0
4,131,905	+		Rru_A3588	0.25	+1.3
4,131,905	+		Rru_A3588	0.25	+0.0
4,131,906	-		Rru_A3588	0.26	+0.0
4,131,906	-		Rru_A3588	0.26	+3.3
4,131,942	+		Rru_A3588	0.30	-0.3
4,131,942	+		Rru_A3588	0.30	+0.4
4,132,023	+		Rru_A3588	0.41	+0.0
4,132,024	-		Rru_A3588	0.41	+1.6
4,132,024	-		Rru_A3588	0.41	+1.9
4,132,220	+		Rru_A3588	0.67	+1.4
4,132,220	+		Rru_A3588	0.67	+1.2
4,132,220	+		Rru_A3588	0.67	+1.4
4,132,220	+		Rru_A3588	0.67	+1.6
4,132,220	+		Rru_A3588	0.67	+2.1
4,132,220	+		Rru_A3588	0.67	+1.0
4,132,221	-		Rru_A3588	0.68	+1.5
4,132,221	-		Rru_A3588	0.68	+0.2
4,132,221	-		Rru_A3588	0.68	+1.0
4,132,238	+		Rru_A3588	0.70	+0.9
4,132,239	-		Rru_A3588	0.70	+0.0
4,132,239	-		Rru_A3588	0.70	+1.5
4,132,374	+		Rru_A3588	0.88	+1.2
4,132,374	+		Rru_A3588	0.88	+0.0
4,132,374	+		Rru_A3588	0.88	+0.0
4,132,375	-		Rru_A3588	0.88	+0.0
4,132,375	-		Rru_A3588	0.88	-1.0
4,132,375	-		Rru_A3588	0.88	+3.5
4,132,375	-		Rru_A3588	0.88	+0.9
4,132,481	-				+0.9
4,132,511	-				+1.4
4,132,535	+				+0.0
4,132,536	-				+0.7
4,132,561	+				+1.6
4,132,851	-		Rru_A3589	0.20	+0.0
4,133,173	+		Rru_A3589	0.41	-0.3
4,133,239	-		Rru_A3589	0.46	+1.1
4,133,540	+		Rru_A3589	0.65	+1.2
4,133,645	+		Rru_A3589	0.72	+0.9
4,133,965	+				+0.0
4,133,965	+				+0.0
4,133,965	+				+0.0
4,134,062	+				+0.0
4,134,062	+				+1.8
4,134,063	-				+0.0
4,134,360	+		Rru_A3590	0.37	+0.3
4,134,427	+		Rru_A3590	0.47	+0.0
4,134,428	-		Rru_A3590	0.48	+0.0
4,134,448	+		Rru_A3590	0.51	+0.0
4,134,607	+		Rru_A3590	0.75	+0.8
4,134,607	+		Rru_A3590	0.75	-0.4
4,134,608	-		Rru_A3590	0.76	+0.4
4,134,608	-		Rru_A3590	0.76	+0.0
4,134,608	-		Rru_A3590	0.76	+0.0
4,134,608	-		Rru_A3590	0.76	+0.0
4,134,608	-		Rru_A3590	0.76	+1.8
4,134,763	+				+0.0
4,134,777	+				+2.1
4,134,784	-				+2.0
4,134,784	-				+0.0
4,134,784	-				+1.2
4,134,798	+				+2.2
4,134,799	-				+0.1
4,134,799	-				+1.7
4,135,010	-		Rru_A3591	0.33	+2.2
4,135,044	+		Rru_A3591	0.37	+1.9
4,135,044	+		Rru_A3591	0.37	+0.3
4,135,044	+		Rru_A3591	0.37	-1.0
4,135,044	+		Rru_A3591	0.37	+0.0
4,135,044	+		Rru_A3591	0.37	+0.1
4,135,045	-		Rru_A3591	0.37	+1.6