Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3571

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
4,115,444	+				-0.0
4,115,444	+				+2.3
4,115,452	+				+1.4
4,115,452	+				+0.9
4,115,455	+				-0.0
4,115,455	+				+1.0
4,115,455	+				+1.1
4,115,456	-				+1.6
4,115,456	-				+0.9
4,115,456	-				+2.6
4,115,456	-				+1.7
4,115,456	-				+0.8
4,115,480	-				+1.0
4,115,535	-				+1.2
4,115,537	-				+1.3
4,115,537	-				-0.0
4,115,537	-				+1.8
4,115,552	-				-1.0
4,115,879	-		Rru_A3570	0.81	+1.3
4,115,879	-		Rru_A3570	0.81	+1.3
4,115,903	+		Rru_A3570	0.87	-0.0
4,115,903	+		Rru_A3570	0.87	+0.4
4,115,903	+		Rru_A3570	0.87	-0.5
4,115,903	+		Rru_A3570	0.87	-0.0
4,115,903	+		Rru_A3570	0.87	+1.4
4,115,904	-		Rru_A3570	0.87	-0.0
4,115,904	-		Rru_A3570	0.87	+0.7
4,115,904	-		Rru_A3570	0.87	+0.6
4,115,904	-		Rru_A3570	0.87	+2.0
4,115,959	+				+1.7
4,115,960	-				+1.0
4,115,960	-				-0.0
4,115,960	-				+1.3
4,116,048	+				+0.2
4,116,048	+				-1.0
4,116,048	+				+2.1
4,116,048	+				-0.4
4,116,560	-		Rru_A3571	0.51	-0.0
4,116,885	+		Rru_A3571	0.82	-0.2
4,116,885	+		Rru_A3571	0.82	-0.0
4,116,886	-		Rru_A3571	0.82	+1.0
4,116,886	-		Rru_A3571	0.82	-0.1
4,116,973	+				-0.0
4,116,973	+				+0.9
4,116,973	+				+1.3
4,117,243	+				+1.2
4,117,243	+				-0.4
4,117,243	+				+0.9
4,117,244	-				+1.6
4,117,244	-				+0.2
4,117,271	+				+0.7
4,117,367	+				+2.0
4,117,367	+				+0.5
4,117,368	-				+0.5
4,117,419	+		Rru_A3572	0.27	+0.5
4,117,420	-		Rru_A3572	0.27	+1.3
4,117,557	+		Rru_A3572	0.74	+1.0
4,117,557	+		Rru_A3572	0.74	+0.5
4,117,558	-		Rru_A3572	0.75	+1.6
4,117,599	+		Rru_A3572	0.89	-0.0
4,117,599	+		Rru_A3572	0.89	+0.5
4,117,599	+		Rru_A3572	0.89	-0.0
4,117,600	-		Rru_A3572	0.89	-0.0
4,117,600	-		Rru_A3572	0.89	+2.4
4,117,601	+		Rru_A3572	0.89	-0.0
4,117,601	+		Rru_A3572	0.89	-0.0
4,117,641	+				-0.3
4,117,641	+				+0.7
4,117,641	+				-0.0
4,117,642	-				-0.4
4,117,642	-				+1.0
4,117,642	-				+1.3
4,117,857	+		Rru_A3573	0.49	-0.0
4,118,061	+				-1.0
4,118,061	+				+0.8