Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3557

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
4,096,121	-				-0.0
4,096,123	-				-0.0
4,096,123	-				-0.0
4,096,123	-				+0.9
4,096,123	-				-0.0
4,096,123	-				+1.8
4,096,125	-				-0.0
4,096,125	-				+1.0
4,096,125	-				-0.1
4,096,125	-				+1.0
4,096,225	-				+0.7
4,096,225	-				-0.0
4,096,301	-				+2.2
4,096,302	+				+1.0
4,096,302	+				-0.1
4,096,302	+				+0.7
4,096,303	-				-1.3
4,096,303	-				+1.6
4,096,303	-				+0.6
4,096,303	-				-0.0
4,096,303	-				+1.7
4,096,303	-				+1.6
4,096,303	-				-0.0
4,096,303	-				+1.9
4,096,353	-				-0.0
4,096,354	+				+1.0
4,096,354	+				+0.7
4,096,355	-				+1.6
4,096,593	-				+2.0
4,096,603	+				-0.0
4,096,603	+				-0.0
4,096,604	-				+2.2
4,096,663	-				-0.0
4,096,673	+				+0.3
4,096,673	+				+1.1
4,096,674	-				-0.0
4,096,684	+				-1.0
4,096,744	-				+2.6
4,096,889	+		Rru_A3557	0.26	+2.2
4,096,890	-		Rru_A3557	0.26	-0.0
4,096,890	-		Rru_A3557	0.26	+0.4
4,096,890	-		Rru_A3557	0.26	-0.0
4,097,006	+		Rru_A3557	0.39	-0.0
4,097,006	+		Rru_A3557	0.39	+3.2
4,097,006	+		Rru_A3557	0.39	+1.9
4,097,007	-		Rru_A3557	0.39	+1.8
4,097,173	-		Rru_A3557	0.57	-0.0
4,097,173	-		Rru_A3557	0.57	+1.2
4,097,417	+		Rru_A3557	0.84	+1.8
4,097,444	+		Rru_A3557	0.87	+2.6
4,097,444	+		Rru_A3557	0.87	+0.4
4,097,444	+		Rru_A3557	0.87	+1.0
4,097,445	-		Rru_A3557	0.87	+1.0
4,097,450	+		Rru_A3557	0.88	+0.6
4,097,450	+		Rru_A3557	0.88	+1.0
4,097,691	-				+0.0
4,097,693	+				+0.2
4,097,693	+				+0.0
4,097,693	+				+1.6
4,097,786	-				-1.0
4,097,874	-		Rru_A3558	0.12	+0.0
4,098,105	-		Rru_A3558	0.42	+0.0
4,098,230	+		Rru_A3558	0.59	+0.0
4,098,230	+		Rru_A3558	0.59	+0.0
4,098,479	+				-1.0
4,098,515	+				-1.0
4,098,515	+				+0.0
4,098,536	+				+0.0
4,098,537	-				-0.6