Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3520

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
4,051,106	-		Rru_A3518	0.64	-1.0
4,051,106	-		Rru_A3518	0.64	-0.0
4,051,110	+		Rru_A3518	0.65	+1.6
4,051,111	-		Rru_A3518	0.65	+1.0
4,051,111	-		Rru_A3518	0.65	-0.0
4,051,202	+		Rru_A3518	0.75	-0.0
4,051,203	-		Rru_A3518	0.75	+1.3
4,051,203	-		Rru_A3518	0.75	-0.0
4,051,203	-		Rru_A3518	0.75	+1.3
4,051,203	-		Rru_A3518	0.75	-1.0
4,051,232	+		Rru_A3518	0.78	-0.0
4,051,232	+		Rru_A3518	0.78	-0.0
4,051,232	+		Rru_A3518	0.78	+1.3
4,051,232	+		Rru_A3518	0.78	-0.0
4,051,232	+		Rru_A3518	0.78	+1.3
4,051,232	+		Rru_A3518	0.78	+1.3
4,051,232	+		Rru_A3518	0.78	-0.0
4,051,232	+		Rru_A3518	0.78	-0.0
4,051,232	+		Rru_A3518	0.78	-0.0
4,051,232	+		Rru_A3518	0.78	+3.3
4,051,232	+		Rru_A3518	0.78	-0.0
4,051,233	-		Rru_A3518	0.78	+1.5
4,051,233	-		Rru_A3518	0.78	-1.0
4,051,233	-		Rru_A3518	0.78	+0.5
4,051,233	-		Rru_A3518	0.78	-1.0
4,051,233	-		Rru_A3518	0.78	-0.0
4,051,233	-		Rru_A3518	0.78	+1.7
4,051,233	-		Rru_A3518	0.78	+1.2
4,051,233	-		Rru_A3518	0.78	+0.6
4,051,394	+				-0.6
4,051,422	+				-1.0
4,051,422	+				+1.2
4,051,422	+				-0.0
4,051,422	+				+0.5
4,051,422	+				+0.2
4,051,423	-				-0.0
4,051,831	+		Rru_A3519	0.74	+1.2
4,051,831	+		Rru_A3519	0.74	+1.5
4,051,832	-		Rru_A3519	0.74	+1.8
4,051,832	-		Rru_A3519	0.74	+1.6
4,051,832	-		Rru_A3519	0.74	+0.5
4,051,832	-		Rru_A3519	0.74	+0.9
4,051,873	+		Rru_A3519	0.83	+1.0
4,051,873	+		Rru_A3519	0.83	+0.1
4,051,874	-		Rru_A3519	0.83	+1.8
4,051,874	-		Rru_A3519	0.83	-0.0
4,051,874	-		Rru_A3519	0.83	+0.8
4,051,874	-		Rru_A3519	0.83	+0.8
4,051,874	-		Rru_A3519	0.83	-0.0
4,051,874	-		Rru_A3519	0.83	+1.3
4,051,919	+				+1.0
4,051,947	-				-0.0
4,051,952	+				+1.0
4,051,952	+				+0.7
4,052,017	-				-0.0
4,052,064	+				-0.0
4,052,065	-				+2.1
4,052,065	-				+1.7
4,052,065	-				+2.1
4,052,319	+		Rru_A3520	0.20	+1.3
4,052,320	-		Rru_A3520	0.20	+0.5
4,052,320	-		Rru_A3520	0.20	-0.0
4,052,320	-		Rru_A3520	0.20	-0.0
4,052,323	+		Rru_A3520	0.20	-0.0
4,052,323	+		Rru_A3520	0.20	-0.0
4,052,323	+		Rru_A3520	0.20	+1.0
4,052,324	-		Rru_A3520	0.20	-0.0
4,052,324	-		Rru_A3520	0.20	+2.0
4,052,392	+		Rru_A3520	0.25	+2.0
4,052,392	+		Rru_A3520	0.25	+0.6
4,052,393	-		Rru_A3520	0.25	-0.0
4,052,393	-		Rru_A3520	0.25	+1.1
4,052,410	+		Rru_A3520	0.27	+0.4
4,052,412	+		Rru_A3520	0.27	+1.4
4,052,412	+		Rru_A3520	0.27	+1.2
4,052,412	+		Rru_A3520	0.27	-0.0
4,052,412	+		Rru_A3520	0.27	+1.3
4,052,412	+		Rru_A3520	0.27	-0.0
4,052,413	-		Rru_A3520	0.27	-0.0
4,052,413	-		Rru_A3520	0.27	-0.0
4,052,425	+		Rru_A3520	0.28	+0.3
4,052,425	+		Rru_A3520	0.28	+1.9
4,052,426	-		Rru_A3520	0.28	+1.3
4,052,426	-		Rru_A3520	0.28	-0.0
4,052,538	+		Rru_A3520	0.36	-0.0
4,052,538	+		Rru_A3520	0.36	-0.0
4,052,707	+		Rru_A3520	0.49	+1.1
4,052,758	+		Rru_A3520	0.53	-0.0
4,052,776	+		Rru_A3520	0.55	+0.7
4,052,776	+		Rru_A3520	0.55	-0.0
4,052,777	-		Rru_A3520	0.55	-0.0
4,052,777	-		Rru_A3520	0.55	-1.0
4,052,777	-		Rru_A3520	0.55	-0.0
4,053,075	+		Rru_A3520	0.78	+1.2
4,053,075	+		Rru_A3520	0.78	+1.6
4,053,305	+				+1.3
4,053,305	+				+1.2
4,053,305	+				-0.0
4,053,305	+				-0.0
4,053,305	+				-0.0