Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3512
Experiment: Succinic Acid; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Succinic Acid; Light intensity 9 uM |
|---|---|---|---|---|---|
| remove | |||||
| 4,042,553 | + | -1.6 | |||
| 4,042,554 | - | -0.0 | |||
| 4,042,678 | + | Rru_A3512 | 0.12 | +1.0 | |
| 4,042,679 | - | Rru_A3512 | 0.13 | +2.4 | |
| 4,042,756 | + | Rru_A3512 | 0.23 | +0.9 | |
| 4,042,771 | + | Rru_A3512 | 0.25 | -0.0 | |
| 4,042,772 | - | Rru_A3512 | 0.25 | +1.9 | |
| 4,042,888 | + | Rru_A3512 | 0.41 | +1.5 | |
| 4,042,889 | - | Rru_A3512 | 0.41 | +2.2 | |
| 4,042,889 | - | Rru_A3512 | 0.41 | -0.0 | |
| 4,043,004 | + | Rru_A3512 | 0.57 | -0.0 | |
| 4,043,004 | + | Rru_A3512 | 0.57 | -0.0 | |
| 4,043,326 | - | +0.2 |
Or see this region's nucleotide sequence