Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3467

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,991,475	+		Rru_A3466	0.22	+0.4
3,991,476	-		Rru_A3466	0.22	+0.6
3,991,476	-		Rru_A3466	0.22	-1.0
3,991,613	-		Rru_A3466	0.33	+0.7
3,991,749	-		Rru_A3466	0.44	+0.1
3,991,749	-		Rru_A3466	0.44	+0.0
3,991,749	-		Rru_A3466	0.44	+0.0
3,991,749	-		Rru_A3466	0.44	-0.2
3,991,749	-		Rru_A3466	0.44	+0.7
3,991,774	+		Rru_A3466	0.46	+0.8
3,991,774	+		Rru_A3466	0.46	+1.5
3,992,134	+		Rru_A3466	0.75	+0.4
3,992,135	-		Rru_A3466	0.75	+1.6
3,992,135	-		Rru_A3466	0.75	+0.0
3,992,251	+		Rru_A3466	0.84	-0.1
3,992,341	+				+0.0
3,992,341	+				+1.0
3,992,341	+				+0.3
3,992,341	+				+0.4
3,992,341	+				-0.3
3,992,341	+				+0.0
3,992,341	+				-1.0
3,992,341	+				+2.6
3,992,341	+				-0.9
3,992,341	+				+0.6
3,992,341	+				+0.0
3,992,342	-				-1.0
3,992,342	-				+0.3
3,992,342	-				+0.5
3,992,345	+				+0.0
3,992,345	+				+1.3
3,992,346	-				+0.0
3,992,346	-				+0.0
3,992,346	-				+0.6
3,992,377	+				+2.3
3,992,377	+				+0.0
3,992,378	-				+0.0
3,992,378	-				+1.2
3,992,459	+				+0.0
3,992,460	-				+2.0
3,992,525	+				-1.0
3,992,525	+				+1.2
3,992,525	+				+0.0
3,992,525	+				+0.0
3,992,526	-				+0.0
3,992,526	-				+0.0
3,992,526	-				-1.0
3,992,665	-		Rru_A3467	0.23	+2.8
3,992,665	-		Rru_A3467	0.23	+0.0
3,992,802	+		Rru_A3467	0.39	+0.3
3,992,803	-		Rru_A3467	0.39	+0.0
3,992,813	+		Rru_A3467	0.40	+1.0
3,992,813	+		Rru_A3467	0.40	-1.0
3,992,813	+		Rru_A3467	0.40	+0.0
3,992,813	+		Rru_A3467	0.40	-1.0
3,992,813	+		Rru_A3467	0.40	+0.0
3,992,813	+		Rru_A3467	0.40	+1.0
3,992,813	+		Rru_A3467	0.40	+0.0
3,992,814	-		Rru_A3467	0.40	+0.0
3,992,814	-		Rru_A3467	0.40	+0.5
3,992,814	-		Rru_A3467	0.40	+2.7
3,992,814	-		Rru_A3467	0.40	+0.0
3,993,133	-		Rru_A3467	0.76	+0.0
3,993,287	+				+1.0
3,993,288	-				+0.0
3,993,288	-				+1.6
3,993,288	-				+0.7
3,993,288	-				+0.3
3,993,288	-				+0.0
3,993,324	+				+0.0
3,993,371	-				+3.2
3,993,436	+				+0.0
3,993,444	+				+1.3
3,993,444	+				+1.0
3,993,677	-		Rru_A3468	0.37	+0.0
3,993,726	+		Rru_A3468	0.48	+2.0
3,993,726	+		Rru_A3468	0.48	+0.6
3,993,803	-		Rru_A3468	0.66	+0.0
3,993,945	-				+0.3
3,993,995	+				+0.5
3,994,059	-				-1.0
3,994,059	-				+0.0
3,994,300	-		Rru_A3469	0.33	-0.4
3,994,300	-		Rru_A3469	0.33	-1.0
3,994,342	+		Rru_A3469	0.39	+1.0
3,994,342	+		Rru_A3469	0.39	-1.0
3,994,342	+		Rru_A3469	0.39	+0.9