Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3432
Experiment: Succinic Acid; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Succinic Acid; Light intensity 9 uM |
---|---|---|---|---|---|
remove | |||||
3,950,345 | + | Rru_A3432 | 0.17 | +1.3 | |
3,950,345 | + | Rru_A3432 | 0.17 | +0.9 | |
3,950,635 | + | Rru_A3432 | 0.36 | +0.0 | |
3,950,635 | + | Rru_A3432 | 0.36 | +1.2 | |
3,950,635 | + | Rru_A3432 | 0.36 | +1.4 | |
3,950,727 | + | Rru_A3432 | 0.42 | +0.0 | |
3,950,727 | + | Rru_A3432 | 0.42 | +0.0 | |
3,950,727 | + | Rru_A3432 | 0.42 | +0.0 | |
3,950,727 | + | Rru_A3432 | 0.42 | +1.8 | |
3,950,727 | + | Rru_A3432 | 0.42 | +1.0 | |
3,950,727 | + | Rru_A3432 | 0.42 | +1.0 | |
3,950,728 | - | Rru_A3432 | 0.42 | +0.0 | |
3,951,168 | + | Rru_A3432 | 0.71 | +0.0 | |
3,951,168 | + | Rru_A3432 | 0.71 | +0.0 | |
3,951,168 | + | Rru_A3432 | 0.71 | +1.4 | |
3,951,168 | + | Rru_A3432 | 0.71 | +0.0 | |
3,951,168 | + | Rru_A3432 | 0.71 | +1.0 | |
3,951,168 | + | Rru_A3432 | 0.71 | +0.0 | |
3,951,168 | + | Rru_A3432 | 0.71 | +0.0 | |
3,951,169 | - | Rru_A3432 | 0.71 | +0.0 | |
3,951,169 | - | Rru_A3432 | 0.71 | +1.1 | |
3,951,169 | - | Rru_A3432 | 0.71 | +1.2 | |
3,951,169 | - | Rru_A3432 | 0.71 | +1.0 | |
3,951,315 | + | Rru_A3432 | 0.80 | +0.4 | |
3,951,340 | + | Rru_A3432 | 0.82 | +0.0 | |
3,952,120 | - | +0.0 | |||
3,952,273 | + | +1.0 | |||
3,952,273 | + | +0.0 |
Or see this region's nucleotide sequence