Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3376
Experiment: Succinic Acid; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Succinic Acid; Light intensity 9 uM |
---|---|---|---|---|---|
remove | |||||
3,891,057 | + | +0.0 | |||
3,891,057 | + | +1.0 | |||
3,891,058 | - | +2.9 | |||
3,891,058 | - | +1.9 | |||
3,891,058 | - | +1.6 | |||
3,893,307 | - | +0.2 | |||
3,893,326 | - | +1.0 | |||
3,893,326 | - | +0.0 | |||
3,893,326 | - | -1.0 | |||
3,893,389 | - | +0.0 | |||
3,893,389 | - | +2.7 | |||
3,893,389 | - | +1.2 | |||
3,893,401 | - | +1.7 | |||
3,893,421 | - | +2.0 | |||
3,893,479 | + | Rru_A3377 | 0.16 | +0.7 | |
3,893,480 | - | Rru_A3377 | 0.16 | +1.2 | |
3,894,134 | + | +3.2 | |||
3,894,134 | + | +1.2 | |||
3,894,135 | - | +0.0 | |||
3,894,164 | + | +0.7 | |||
3,894,246 | + | +0.0 | |||
3,894,246 | + | +0.2 | |||
3,894,248 | + | +1.6 | |||
3,894,248 | + | +1.4 | |||
3,894,248 | + | -1.0 | |||
3,894,249 | - | +1.6 |
Or see this region's nucleotide sequence