Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3374

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,888,541	+		Rru_A3372	0.61	+0.0
3,888,541	+		Rru_A3372	0.61	+0.2
3,888,542	-		Rru_A3372	0.61	+0.6
3,888,542	-		Rru_A3372	0.61	+0.0
3,888,596	+		Rru_A3372	0.70	+0.0
3,888,596	+		Rru_A3372	0.70	+0.0
3,888,597	-		Rru_A3372	0.70	+1.1
3,888,597	-		Rru_A3372	0.70	+0.6
3,888,597	-		Rru_A3372	0.70	+0.2
3,888,597	-		Rru_A3372	0.70	+0.4
3,888,780	-				+1.0
3,888,842	+				+0.5
3,888,842	+				+0.0
3,888,842	+				+1.9
3,888,892	+				+1.5
3,888,892	+				+1.2
3,888,892	+				+0.8
3,888,892	+				+0.0
3,889,444	+				+1.2
3,889,445	-				+0.0
3,889,445	-				+2.9
3,889,473	+				+0.7
3,889,564	-				+1.7
3,889,564	-				+1.5
3,889,595	-				+1.3
3,890,116	-		Rru_A3374	0.40	+1.7
3,890,116	-		Rru_A3374	0.40	+0.9
3,890,164	-		Rru_A3374	0.44	+2.1
3,890,164	-		Rru_A3374	0.44	+1.0
3,890,188	+		Rru_A3374	0.45	+2.5
3,890,189	-		Rru_A3374	0.45	+0.9
3,890,189	-		Rru_A3374	0.45	+0.8
3,890,189	-		Rru_A3374	0.45	-1.0
3,890,189	-		Rru_A3374	0.45	+2.7
3,890,799	+		Rru_A3374	0.86	-1.0
3,890,799	+		Rru_A3374	0.86	+2.2
3,890,998	+				+1.7
3,890,998	+				+0.0
3,890,998	+				+0.3
3,890,999	-				+2.1
3,890,999	-				+1.2
3,891,057	+				+0.0
3,891,057	+				+1.0
3,891,058	-				+2.9
3,891,058	-				+1.9
3,891,058	-				+1.6