Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3343

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,854,327	+				-0.1
3,854,356	+				+0.0
3,854,357	-				+0.5
3,854,366	+				+0.9
3,854,366	+				+1.4
3,854,367	-				+0.0
3,854,464	-		Rru_A3342	0.20	+1.3
3,854,685	+		Rru_A3342	0.45	+0.7
3,854,695	-		Rru_A3342	0.46	+1.6
3,854,837	+		Rru_A3342	0.63	+0.0
3,854,839	+		Rru_A3342	0.63	+1.2
3,854,857	-		Rru_A3342	0.65	+1.8
3,854,937	+		Rru_A3342	0.74	+0.4
3,854,952	+		Rru_A3342	0.76	+0.0
3,855,054	+		Rru_A3342	0.87	+0.0
3,855,092	+				+1.0
3,855,093	-				+0.8
3,855,191	-				+0.9
3,855,363	+				+0.5
3,855,367	-				+0.8
3,855,424	+		Rru_A3343	0.17	+0.8
3,855,424	+		Rru_A3343	0.17	+0.3
3,855,425	-		Rru_A3343	0.17	+1.1
3,855,481	+		Rru_A3343	0.25	+0.7
3,855,481	+		Rru_A3343	0.25	+0.7
3,855,481	+		Rru_A3343	0.25	+0.3
3,855,484	+		Rru_A3343	0.25	-0.4
3,855,485	-		Rru_A3343	0.25	+0.6
3,855,485	-		Rru_A3343	0.25	-0.1
3,855,493	+		Rru_A3343	0.26	+1.1
3,855,493	+		Rru_A3343	0.26	+0.6
3,855,493	+		Rru_A3343	0.26	+0.0
3,855,494	-		Rru_A3343	0.26	+0.7
3,855,494	-		Rru_A3343	0.26	+0.0
3,855,494	-		Rru_A3343	0.26	+0.7
3,855,494	-		Rru_A3343	0.26	+1.3
3,855,494	-		Rru_A3343	0.26	+1.4
3,855,576	+		Rru_A3343	0.38	+0.9
3,855,576	+		Rru_A3343	0.38	+0.4
3,855,723	+		Rru_A3343	0.58	-0.3
3,855,724	-		Rru_A3343	0.59	+0.2
3,855,766	+		Rru_A3343	0.64	+0.0
3,855,767	-		Rru_A3343	0.65	+0.0
3,855,832	-		Rru_A3343	0.74	+0.2
3,855,886	-		Rru_A3343	0.81	+0.8
3,855,886	-		Rru_A3343	0.81	-1.0
3,855,931	+		Rru_A3343	0.87	+0.7
3,856,013	+				+0.7
3,856,013	+				+0.0
3,856,013	+				+0.0
3,856,014	-				+0.0
3,856,018	+				+0.0
3,856,066	+				+0.0
3,856,067	-				+0.0
3,856,067	-				+0.0
3,856,067	-				+1.0
3,856,067	-				+1.6
3,856,263	-		Rru_A3344	0.52	+1.0
3,856,356	+		Rru_A3344	0.77	-0.6
3,856,356	+		Rru_A3344	0.77	+4.0
3,856,357	-		Rru_A3344	0.77	+2.0
3,856,413	+				+0.2
3,856,415	+				+0.0
3,856,449	-				+0.0
3,856,532	-				+2.2
3,856,884	+				+0.0