Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3328

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,839,124	+		Rru_A3327	0.73	+2.3
3,839,125	-		Rru_A3327	0.73	+0.0
3,839,125	-		Rru_A3327	0.73	+2.1
3,839,160	+		Rru_A3327	0.76	+0.0
3,839,160	+		Rru_A3327	0.76	-1.6
3,839,161	-		Rru_A3327	0.76	+1.2
3,839,161	-		Rru_A3327	0.76	+1.6
3,839,161	-		Rru_A3327	0.76	+1.6
3,839,190	+		Rru_A3327	0.79	+0.3
3,839,191	-		Rru_A3327	0.79	+0.0
3,839,191	-		Rru_A3327	0.79	+1.2
3,839,191	-		Rru_A3327	0.79	+0.0
3,839,191	-		Rru_A3327	0.79	+1.6
3,839,287	-		Rru_A3327	0.87	+0.4
3,839,289	+		Rru_A3327	0.87	+1.0
3,839,354	+				+0.0
3,839,642	-		Rru_A3328	0.10	+0.0
3,839,732	+		Rru_A3328	0.21	+0.0
3,839,732	+		Rru_A3328	0.21	-2.6
3,839,732	+		Rru_A3328	0.21	-0.7
3,839,733	-		Rru_A3328	0.22	+0.0
3,839,733	-		Rru_A3328	0.22	+0.0
3,839,735	-		Rru_A3328	0.22	-1.1
3,839,761	+		Rru_A3328	0.25	+0.0
3,839,762	-		Rru_A3328	0.25	+0.0
3,839,856	-		Rru_A3328	0.36	+0.0
3,840,109	+		Rru_A3328	0.67	+0.0
3,840,109	+		Rru_A3328	0.67	+0.0
3,840,109	+		Rru_A3328	0.67	+0.4
3,840,109	+		Rru_A3328	0.67	+0.0
3,840,109	+		Rru_A3328	0.67	+1.6
3,840,187	+		Rru_A3328	0.77	-0.3
3,840,187	+		Rru_A3328	0.77	-0.4
3,840,188	-		Rru_A3328	0.77	+0.9
3,840,188	-		Rru_A3328	0.77	+1.3
3,840,191	-		Rru_A3328	0.77	+0.0
3,840,215	-		Rru_A3328	0.80	+1.6
3,840,244	+		Rru_A3328	0.84	-1.0
3,840,244	+		Rru_A3328	0.84	-0.6
3,840,293	+		Rru_A3328	0.90	+0.0
3,840,307	+				+0.0
3,840,307	+				-1.6
3,840,308	-				+0.0
3,840,308	-				+0.0
3,840,315	+				-1.0
3,840,315	+				+0.0
3,840,315	+				-1.6
3,840,315	+				-1.7
3,840,316	-				+0.0
3,840,316	-				+1.6
3,840,316	-				+0.0
3,840,332	+				+1.6
3,840,333	-				+0.0
3,840,333	-				+1.0
3,840,337	-				+0.3
3,840,368	+				+0.4
3,840,368	+				-1.0
3,840,368	+				+0.0
3,840,368	+				+0.0
3,840,368	+				+0.4
3,840,368	+				+0.0
3,840,369	-				+0.4
3,840,454	+				+0.0
3,840,455	-				+2.5
3,840,458	+				-1.0
3,840,458	+				+0.0
3,840,458	+				-1.0
3,840,458	+				+0.0
3,840,459	-				+2.3
3,840,459	-				+2.4
3,840,620	+				+1.0
3,840,620	+				+0.0
3,840,620	+				+0.0
3,840,620	+				+1.4
3,840,621	-				-1.0
3,840,622	+				-1.0
3,840,659	+				+0.0
3,840,659	+				+0.0
3,840,659	+				+0.0
3,840,659	+				+0.0
3,840,725	-		Rru_A3329	0.14	+2.0
3,840,777	+		Rru_A3329	0.18	+0.0
3,840,917	-		Rru_A3329	0.29	+0.0
3,840,955	-		Rru_A3329	0.32	+0.0
3,840,956	+		Rru_A3329	0.32	+0.0
3,840,957	-		Rru_A3329	0.32	+0.4
3,841,107	+		Rru_A3329	0.44	+0.0
3,841,107	+		Rru_A3329	0.44	+0.0
3,841,185	+		Rru_A3329	0.50	+0.0
3,841,191	+		Rru_A3329	0.51	+0.0