Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3305

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,803,289	-		Rru_A3303	0.88	+2.0
3,803,304	+		Rru_A3303	0.89	-1.0
3,803,304	+		Rru_A3303	0.89	+1.8
3,803,304	+		Rru_A3303	0.89	+0.0
3,803,304	+		Rru_A3303	0.89	+1.0
3,803,305	-		Rru_A3303	0.89	+0.0
3,803,305	-		Rru_A3303	0.89	+0.6
3,803,305	-		Rru_A3303	0.89	+0.6
3,803,392	-				+0.0
3,803,430	+				+0.0
3,803,430	+				+0.5
3,803,431	-				+0.0
3,803,489	+				+2.6
3,803,490	-				+0.0
3,803,490	-				+0.0
3,803,524	+				+0.8
3,803,524	+				+0.0
3,803,524	+				+0.0
3,803,524	+				+1.7
3,803,525	-				+1.1
3,803,525	-				+0.0
3,803,525	-				+0.0
3,803,679	-		Rru_A3304	0.22	+0.9
3,803,965	+		Rru_A3304	0.60	+2.0
3,803,965	+		Rru_A3304	0.60	+0.0
3,804,129	+		Rru_A3304	0.82	+0.0
3,804,129	+		Rru_A3304	0.82	-1.0
3,804,129	+		Rru_A3304	0.82	+1.2
3,804,129	+		Rru_A3304	0.82	+1.0
3,804,130	-		Rru_A3304	0.82	+1.4
3,804,205	+				-1.6
3,804,205	+				-0.7
3,804,205	+				+0.7
3,804,205	+				+1.0
3,804,205	+				+1.0
3,804,205	+				+1.6
3,804,206	-				+1.0
3,804,206	-				+0.4
3,804,206	-				+0.8
3,804,206	-				+1.2
3,804,206	-				+2.0
3,804,206	-				+1.5
3,804,244	+				+0.7
3,804,244	+				+0.0
3,804,244	+				-1.0
3,804,244	+				+1.1
3,804,244	+				+1.1
3,804,244	+				+1.3
3,804,244	+				+0.0
3,804,244	+				-1.6
3,804,245	-				+0.0
3,804,245	-				-1.0
3,804,245	-				+0.0
3,804,245	-				+0.0
3,804,245	-				+0.0
3,804,246	+				+2.0
3,804,247	-				+0.3
3,804,327	-				+1.0
3,804,327	-				+0.0
3,804,508	+		Rru_A3305	0.34	-1.6
3,804,844	-		Rru_A3305	0.80	+0.1
3,804,896	+		Rru_A3305	0.87	-0.1
3,804,896	+		Rru_A3305	0.87	+0.0
3,804,896	+		Rru_A3305	0.87	+0.9
3,804,974	+				-0.6
3,804,975	-				+0.0
3,804,975	-				+2.4
3,805,057	-				+1.9
3,805,057	-				-0.4
3,805,057	-				+0.8
3,805,057	-				+0.4
3,805,131	+		Rru_A3306	0.17	+1.5
3,805,132	-		Rru_A3306	0.17	+1.1
3,805,132	-		Rru_A3306	0.17	+0.0
3,805,132	-		Rru_A3306	0.17	+0.4
3,805,266	+		Rru_A3306	0.32	+1.0
3,805,267	-		Rru_A3306	0.32	+1.2
3,805,267	-		Rru_A3306	0.32	+1.7
3,805,268	+		Rru_A3306	0.32	+0.0
3,805,268	+		Rru_A3306	0.32	+1.2
3,805,269	-		Rru_A3306	0.32	+1.4
3,805,284	+		Rru_A3306	0.34	+1.3
3,805,284	+		Rru_A3306	0.34	+0.7
3,805,344	+		Rru_A3306	0.41	+2.5
3,805,345	-		Rru_A3306	0.41	+0.0
3,805,366	-		Rru_A3306	0.43	+1.0
3,805,366	-		Rru_A3306	0.43	+0.0
3,805,366	-		Rru_A3306	0.43	+1.5
3,805,585	-		Rru_A3306	0.68	+0.0
3,805,585	-		Rru_A3306	0.68	-0.3
3,805,779	+		Rru_A3306	0.90	+0.0
3,805,866	+				+1.0
3,805,866	+				+0.0
3,805,866	+				+2.4
3,805,866	+				+0.0