Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3285

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,780,231	+		Rru_A3283	0.28	+0.0
3,780,571	+				+0.9
3,780,571	+				-0.7
3,780,571	+				+1.1
3,780,572	-				+1.0
3,780,611	+				+1.9
3,780,657	+				+0.0
3,780,657	+				+0.0
3,780,737	+				+0.0
3,780,768	-				+0.0
3,780,768	-				+1.2
3,780,917	+		Rru_A3284	0.48	+0.0
3,780,917	+		Rru_A3284	0.48	+0.1
3,780,917	+		Rru_A3284	0.48	+0.0
3,780,918	-		Rru_A3284	0.49	+2.8
3,780,918	-		Rru_A3284	0.49	+2.1
3,780,918	-		Rru_A3284	0.49	+2.0
3,781,005	+		Rru_A3284	0.74	+0.3
3,781,005	+		Rru_A3284	0.74	+0.7
3,781,005	+		Rru_A3284	0.74	+1.1
3,781,006	-		Rru_A3284	0.75	+2.2
3,781,089	-				+1.6
3,781,182	+				+0.0
3,781,276	-				+0.0
3,781,304	+		Rru_A3285	0.12	-1.0
3,781,304	+		Rru_A3285	0.12	+0.0
3,781,537	-		Rru_A3285	0.41	+1.2
3,781,815	+		Rru_A3285	0.76	+0.0
3,781,815	+		Rru_A3285	0.76	+0.0
3,781,816	-		Rru_A3285	0.76	+0.0
3,781,830	-		Rru_A3285	0.78	+0.0
3,782,024	+				+0.0
3,782,025	-				-0.0
3,782,025	-				+0.0
3,782,030	+				+0.0
3,782,031	-				+1.0
3,782,031	-				-1.6
3,782,065	-				+0.0
3,782,140	+				+0.0
3,782,301	-				+1.3
3,782,357	+				-1.0
3,782,386	+				-1.0
3,782,386	+				-1.0