Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3235

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,729,892	+		Rru_A3234	0.42	+1.3
3,729,893	-		Rru_A3234	0.42	+2.0
3,729,894	+		Rru_A3234	0.42	+0.9
3,729,894	+		Rru_A3234	0.42	+1.1
3,729,894	+		Rru_A3234	0.42	+0.6
3,729,894	+		Rru_A3234	0.42	+1.7
3,729,895	-		Rru_A3234	0.42	+1.5
3,730,033	+		Rru_A3234	0.53	-0.2
3,730,034	-		Rru_A3234	0.53	+0.0
3,730,123	+		Rru_A3234	0.60	+3.2
3,730,123	+		Rru_A3234	0.60	+1.7
3,730,123	+		Rru_A3234	0.60	+0.0
3,730,123	+		Rru_A3234	0.60	+2.2
3,730,124	-		Rru_A3234	0.60	+1.9
3,730,213	+		Rru_A3234	0.67	+1.1
3,730,222	+		Rru_A3234	0.68	+1.7
3,730,222	+		Rru_A3234	0.68	+1.5
3,730,222	+		Rru_A3234	0.68	+1.8
3,730,223	-		Rru_A3234	0.68	+1.2
3,730,241	-		Rru_A3234	0.69	+0.6
3,730,258	+		Rru_A3234	0.71	+0.0
3,730,259	-		Rru_A3234	0.71	+1.1
3,730,267	+		Rru_A3234	0.71	+1.6
3,730,267	+		Rru_A3234	0.71	+0.0
3,730,268	-		Rru_A3234	0.71	+2.0
3,730,456	+		Rru_A3234	0.86	+0.0
3,730,457	-		Rru_A3234	0.86	+0.8
3,730,457	-		Rru_A3234	0.86	+2.0
3,730,598	-				-1.0
3,730,602	+				+2.6
3,730,603	-				+0.9
3,730,603	-				+1.5
3,730,714	+				+1.1
3,730,756	+				+1.6
3,730,756	+				+1.2
3,730,756	+				+0.0
3,730,756	+				+0.0
3,730,756	+				+0.0
3,730,757	-				+3.5
3,730,757	-				+0.0
3,730,765	-				+3.3
3,731,020	+		Rru_A3235	0.18	+0.0
3,731,020	+		Rru_A3235	0.18	+1.1
3,731,020	+		Rru_A3235	0.18	+0.0
3,731,021	-		Rru_A3235	0.18	+0.8
3,731,128	+		Rru_A3235	0.27	+0.0
3,731,128	+		Rru_A3235	0.27	+1.0
3,731,128	+		Rru_A3235	0.27	+0.3
3,731,128	+		Rru_A3235	0.27	-1.0
3,731,129	-		Rru_A3235	0.27	+0.0
3,731,129	-		Rru_A3235	0.27	+1.8
3,731,129	-		Rru_A3235	0.27	+0.0
3,731,129	-		Rru_A3235	0.27	+0.6
3,731,129	-		Rru_A3235	0.27	+1.1
3,731,129	-		Rru_A3235	0.27	+1.0
3,731,129	-		Rru_A3235	0.27	+0.8
3,731,386	+		Rru_A3235	0.49	+0.0
3,731,387	-		Rru_A3235	0.49	+1.8
3,731,398	+		Rru_A3235	0.50	+0.8
3,731,398	+		Rru_A3235	0.50	+0.0
3,731,398	+		Rru_A3235	0.50	+0.6
3,731,570	-		Rru_A3235	0.65	+0.9
3,731,662	+		Rru_A3235	0.73	+0.0
3,731,662	+		Rru_A3235	0.73	+0.0
3,731,662	+		Rru_A3235	0.73	+0.9
3,731,663	-		Rru_A3235	0.73	+0.0
3,731,663	-		Rru_A3235	0.73	+0.0
3,731,664	+		Rru_A3235	0.73	+0.0
3,731,665	-		Rru_A3235	0.73	+1.5
3,731,665	-		Rru_A3235	0.73	+0.0
3,731,980	+				+1.6
3,731,981	-				+0.0
3,731,981	-				-1.0
3,731,981	-				+0.0
3,732,317	+		Rru_A3236	0.15	+1.2
3,732,317	+		Rru_A3236	0.15	+1.2
3,732,318	-		Rru_A3236	0.15	+0.0
3,732,318	-		Rru_A3236	0.15	+0.0
3,732,319	+		Rru_A3236	0.15	+0.6
3,732,319	+		Rru_A3236	0.15	+0.9
3,732,319	+		Rru_A3236	0.15	-1.0
3,732,319	+		Rru_A3236	0.15	+0.7
3,732,320	-		Rru_A3236	0.15	+1.8
3,732,320	-		Rru_A3236	0.15	+1.1
3,732,320	-		Rru_A3236	0.15	+0.0
3,732,320	-		Rru_A3236	0.15	+1.3
3,732,372	-		Rru_A3236	0.18	+2.8
3,732,770	+		Rru_A3236	0.38	+0.6
3,732,835	+		Rru_A3236	0.42	+1.2
3,732,836	-		Rru_A3236	0.42	+0.9