Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3232

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,725,679	+		Rru_A3231	0.15	+0.6
3,725,679	+		Rru_A3231	0.15	+1.3
3,725,679	+		Rru_A3231	0.15	+0.0
3,725,680	-		Rru_A3231	0.15	+0.0
3,725,680	-		Rru_A3231	0.15	+0.0
3,725,680	-		Rru_A3231	0.15	+0.2
3,725,680	-		Rru_A3231	0.15	+0.0
3,725,680	-		Rru_A3231	0.15	+0.7
3,725,680	-		Rru_A3231	0.15	+2.4
3,725,944	+		Rru_A3231	0.54	+1.3
3,725,944	+		Rru_A3231	0.54	+0.0
3,725,944	+		Rru_A3231	0.54	+1.2
3,725,945	-		Rru_A3231	0.54	+2.3
3,725,945	-		Rru_A3231	0.54	+0.0
3,725,945	-		Rru_A3231	0.54	+0.0
3,725,945	-		Rru_A3231	0.54	+1.2
3,725,945	-		Rru_A3231	0.54	+1.8
3,725,945	-		Rru_A3231	0.54	+0.9
3,726,114	+		Rru_A3231	0.79	+1.1
3,726,114	+		Rru_A3231	0.79	+0.0
3,726,115	-		Rru_A3231	0.79	+1.8
3,726,260	-				+1.0
3,726,275	+				+1.0
3,726,276	-				+0.0
3,726,276	-				-1.8
3,726,276	-				+1.9
3,726,319	+				+1.0
3,726,319	+				+1.1
3,726,319	+				+0.2
3,726,320	-				+1.9
3,726,382	+				+0.0
3,726,383	-				+0.0
3,726,383	-				+0.0
3,726,383	-				+0.0
3,726,841	+		Rru_A3232	0.33	+0.0
3,726,842	-		Rru_A3232	0.33	+3.6
3,726,862	+		Rru_A3232	0.34	+0.0
3,726,863	-		Rru_A3232	0.34	+0.6
3,726,863	-		Rru_A3232	0.34	+0.0
3,727,189	+		Rru_A3232	0.55	+0.6
3,727,441	+		Rru_A3232	0.72	+2.8
3,727,442	-		Rru_A3232	0.72	-1.6
3,727,442	-		Rru_A3232	0.72	-0.8
3,727,442	-		Rru_A3232	0.72	+0.3
3,727,442	-		Rru_A3232	0.72	+1.5
3,727,593	+		Rru_A3232	0.82	+1.0
3,727,594	-		Rru_A3232	0.82	+1.9
3,727,603	+		Rru_A3232	0.82	+0.0
3,727,603	+		Rru_A3232	0.82	+0.8
3,727,603	+		Rru_A3232	0.82	+0.0
3,727,604	-		Rru_A3232	0.82	-0.4
3,727,604	-		Rru_A3232	0.82	+1.5
3,727,633	+		Rru_A3232	0.84	+0.0
3,727,634	-		Rru_A3232	0.84	+0.0
3,727,634	-		Rru_A3232	0.84	+0.4
3,727,634	-		Rru_A3232	0.84	+0.0
3,727,635	+		Rru_A3232	0.84	+1.6
3,727,636	-		Rru_A3232	0.84	+0.0
3,727,755	+				+1.1
3,727,755	+				+1.7
3,727,755	+				+0.8
3,727,756	-				+0.9
3,727,756	-				+0.0
3,727,756	-				+0.7
3,727,858	+				+0.0
3,727,858	+				+0.0
3,727,874	-				+0.4
3,727,901	+				+0.0
3,727,901	+				+0.9
3,727,901	+				+0.0
3,727,961	+				+0.0