Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3183

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,673,324	-				+0.3
3,673,418	+		Rru_A3182	0.13	+0.0
3,673,419	-		Rru_A3182	0.13	+1.8
3,673,419	-		Rru_A3182	0.13	+1.0
3,673,627	+		Rru_A3182	0.35	+0.5
3,673,627	+		Rru_A3182	0.35	+0.6
3,673,628	-		Rru_A3182	0.35	+0.3
3,673,628	-		Rru_A3182	0.35	+0.7
3,673,628	-		Rru_A3182	0.35	+1.0
3,673,628	-		Rru_A3182	0.35	+0.3
3,673,628	-		Rru_A3182	0.35	-1.0
3,673,628	-		Rru_A3182	0.35	+0.0
3,673,631	+		Rru_A3182	0.36	-0.6
3,673,631	+		Rru_A3182	0.36	-1.0
3,673,631	+		Rru_A3182	0.36	+1.0
3,673,631	+		Rru_A3182	0.36	+0.8
3,673,631	+		Rru_A3182	0.36	+1.0
3,673,632	-		Rru_A3182	0.36	+0.8
3,673,632	-		Rru_A3182	0.36	+0.0
3,673,632	-		Rru_A3182	0.36	-1.7
3,673,632	-		Rru_A3182	0.36	+1.3
3,673,632	-		Rru_A3182	0.36	+0.6
3,673,632	-		Rru_A3182	0.36	+0.0
3,673,632	-		Rru_A3182	0.36	+0.2
3,673,677	+		Rru_A3182	0.41	+1.2
3,673,944	+		Rru_A3182	0.69	+1.2
3,673,944	+		Rru_A3182	0.69	+1.0
3,674,114	+		Rru_A3182	0.88	+0.6
3,674,114	+		Rru_A3182	0.88	+1.2
3,674,115	-		Rru_A3182	0.88	+0.0
3,674,225	+				+1.2
3,674,231	+				+0.3
3,674,231	+				+3.2
3,674,358	+		Rru_A3183	0.26	+0.5
3,674,359	-		Rru_A3183	0.26	+0.0
3,674,583	+		Rru_A3183	0.72	+1.5
3,674,583	+		Rru_A3183	0.72	+1.4
3,674,755	+				+0.7
3,674,983	+		Rru_A3184	0.28	+0.0
3,675,334	-		Rru_A3184	0.67	+1.0
3,675,514	+		Rru_A3184	0.87	+3.7
3,675,538	+				+0.0
3,675,542	+				+0.7
3,675,542	+				+0.0
3,675,542	+				+0.0
3,675,543	-				+1.2
3,675,543	-				+0.0
3,675,543	-				+0.0
3,675,543	-				+1.0
3,675,562	+				+3.1
3,675,562	+				+0.0
3,675,562	+				+1.3
3,675,563	-				+1.1
3,675,563	-				+2.3
3,675,563	-				-1.0