Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3174

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,664,654	+		Rru_A3172	0.74	+2.0
3,664,654	+		Rru_A3172	0.74	-2.6
3,664,949	+		Rru_A3173	0.21	+0.0
3,664,949	+		Rru_A3173	0.21	+2.5
3,664,950	-		Rru_A3173	0.21	+0.0
3,665,051	+		Rru_A3173	0.37	-1.6
3,665,052	-		Rru_A3173	0.37	-1.6
3,665,270	+		Rru_A3173	0.71	-1.0
3,665,271	-		Rru_A3173	0.71	+0.0
3,665,271	-		Rru_A3173	0.71	-1.0
3,665,471	+				+1.6
3,665,471	+				+0.5
3,665,472	-				+0.6
3,665,665	-				+0.7
3,665,711	+				+1.2
3,665,720	+				+0.8
3,665,721	-				+0.0
3,665,721	-				+0.0
3,665,774	+		Rru_A3174	0.13	+0.0
3,665,774	+		Rru_A3174	0.13	+0.0
3,666,019	+		Rru_A3174	0.33	+1.7
3,666,020	-		Rru_A3174	0.33	-0.5
3,666,293	+		Rru_A3174	0.55	+0.0
3,666,293	+		Rru_A3174	0.55	+1.6
3,666,293	+		Rru_A3174	0.55	+1.6
3,666,294	-		Rru_A3174	0.55	+0.8
3,666,294	-		Rru_A3174	0.55	+2.1
3,666,294	-		Rru_A3174	0.55	+0.7
3,666,294	-		Rru_A3174	0.55	+2.5
3,666,375	+		Rru_A3174	0.61	+0.0
3,666,629	+		Rru_A3174	0.82	+0.0
3,666,629	+		Rru_A3174	0.82	+0.0
3,666,629	+		Rru_A3174	0.82	+0.0
3,666,629	+		Rru_A3174	0.82	+0.9
3,666,629	+		Rru_A3174	0.82	+1.5
3,666,629	+		Rru_A3174	0.82	+0.0
3,666,630	-		Rru_A3174	0.82	+0.9
3,666,630	-		Rru_A3174	0.82	+2.7
3,666,630	-		Rru_A3174	0.82	+0.0
3,666,630	-		Rru_A3174	0.82	+0.0
3,666,630	-		Rru_A3174	0.82	+1.4
3,666,641	+		Rru_A3174	0.83	+0.0
3,666,641	+		Rru_A3174	0.83	+0.0
3,666,642	-		Rru_A3174	0.83	+0.0
3,666,642	-		Rru_A3174	0.83	+0.9
3,666,642	-		Rru_A3174	0.83	+0.7
3,666,719	+		Rru_A3174	0.89	+1.2
3,666,719	+		Rru_A3174	0.89	+2.3
3,666,719	+		Rru_A3174	0.89	+0.0
3,666,720	-		Rru_A3174	0.89	-1.7
3,666,720	-		Rru_A3174	0.89	+0.9
3,666,747	+				+2.0