Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3173

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,663,915	+		Rru_A3171	0.41	+1.1
3,663,915	+		Rru_A3171	0.41	+0.0
3,663,915	+		Rru_A3171	0.41	+0.0
3,663,916	-		Rru_A3171	0.42	+1.5
3,663,916	-		Rru_A3171	0.42	+0.9
3,663,916	-		Rru_A3171	0.42	+0.9
3,663,916	-		Rru_A3171	0.42	+0.0
3,663,936	+		Rru_A3171	0.48	+2.5
3,663,937	-		Rru_A3171	0.48	+0.7
3,663,937	-		Rru_A3171	0.48	+0.9
3,663,937	-		Rru_A3171	0.48	+1.1
3,663,946	+		Rru_A3171	0.51	+2.4
3,663,946	+		Rru_A3171	0.51	+3.0
3,663,946	+		Rru_A3171	0.51	+0.2
3,663,947	-		Rru_A3171	0.51	+0.0
3,663,947	-		Rru_A3171	0.51	+1.1
3,663,947	-		Rru_A3171	0.51	+1.2
3,664,093	-				+0.7
3,664,330	+		Rru_A3172	0.23	+2.6
3,664,569	+		Rru_A3172	0.61	-0.6
3,664,654	+		Rru_A3172	0.74	+2.0
3,664,654	+		Rru_A3172	0.74	-2.6
3,664,949	+		Rru_A3173	0.21	+0.0
3,664,949	+		Rru_A3173	0.21	+2.5
3,664,950	-		Rru_A3173	0.21	+0.0
3,665,051	+		Rru_A3173	0.37	-1.6
3,665,052	-		Rru_A3173	0.37	-1.6
3,665,270	+		Rru_A3173	0.71	-1.0
3,665,271	-		Rru_A3173	0.71	+0.0
3,665,271	-		Rru_A3173	0.71	-1.0
3,665,471	+				+1.6
3,665,471	+				+0.5
3,665,472	-				+0.6
3,665,665	-				+0.7
3,665,711	+				+1.2
3,665,720	+				+0.8
3,665,721	-				+0.0
3,665,721	-				+0.0
3,665,774	+		Rru_A3174	0.13	+0.0
3,665,774	+		Rru_A3174	0.13	+0.0
3,666,019	+		Rru_A3174	0.33	+1.7
3,666,020	-		Rru_A3174	0.33	-0.5
3,666,293	+		Rru_A3174	0.55	+0.0
3,666,293	+		Rru_A3174	0.55	+1.6
3,666,293	+		Rru_A3174	0.55	+1.6
3,666,294	-		Rru_A3174	0.55	+0.8
3,666,294	-		Rru_A3174	0.55	+2.1
3,666,294	-		Rru_A3174	0.55	+0.7
3,666,294	-		Rru_A3174	0.55	+2.5
3,666,375	+		Rru_A3174	0.61	+0.0