Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3158

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,649,233	+		Rru_A3157	0.85	+0.5
3,649,233	+		Rru_A3157	0.85	+0.6
3,649,234	-		Rru_A3157	0.85	+1.6
3,649,234	-		Rru_A3157	0.85	+0.0
3,649,343	+				+0.0
3,649,492	+				-1.0
3,649,492	+				+2.9
3,649,492	+				+1.3
3,649,493	-				-1.0
3,649,493	-				+1.2
3,649,493	-				+0.5
3,649,496	+				+1.5
3,649,496	+				+0.0
3,649,496	+				+2.8
3,649,496	+				+0.0
3,649,497	-				+0.7
3,649,497	-				+0.0
3,649,497	-				+0.0
3,649,505	+				+1.5
3,649,505	+				+0.7
3,649,505	+				+0.0
3,649,505	+				+1.0
3,649,505	+				+1.0
3,649,506	-				+1.1
3,649,506	-				+4.7
3,649,764	-		Rru_A3158	0.37	+1.6
3,649,764	-		Rru_A3158	0.37	-1.0
3,649,764	-		Rru_A3158	0.37	+0.4
3,649,796	+		Rru_A3158	0.44	+0.3
3,649,796	+		Rru_A3158	0.44	+1.0
3,650,056	+				+1.3
3,650,056	+				+1.8
3,650,077	+				+0.3
3,650,078	-				+0.8
3,650,116	-				-1.0
3,650,193	+				+1.1
3,650,193	+				+1.1
3,650,193	+				+1.2
3,650,193	+				-0.7
3,650,194	-				+0.9
3,650,194	-				+2.8
3,650,194	-				+1.4
3,650,194	-				+0.0
3,650,194	-				-1.0
3,650,194	-				+2.0
3,650,289	+		Rru_A3159	0.14	+2.6
3,650,289	+		Rru_A3159	0.14	+2.0
3,650,289	+		Rru_A3159	0.14	-1.0
3,650,289	+		Rru_A3159	0.14	+1.4
3,650,290	-		Rru_A3159	0.14	+1.7
3,650,290	-		Rru_A3159	0.14	+0.0
3,650,309	-		Rru_A3159	0.15	+0.0
3,650,309	-		Rru_A3159	0.15	-0.1
3,650,310	+		Rru_A3159	0.15	+1.8
3,650,311	-		Rru_A3159	0.15	-1.0
3,650,589	+		Rru_A3159	0.37	-0.2
3,650,590	-		Rru_A3159	0.37	+1.6
3,650,631	+		Rru_A3159	0.40	+0.0
3,650,631	+		Rru_A3159	0.40	+0.0
3,650,632	-		Rru_A3159	0.40	+0.0
3,650,659	-		Rru_A3159	0.42	+0.9
3,650,670	+		Rru_A3159	0.43	+3.0
3,650,671	-		Rru_A3159	0.43	+2.7
3,650,685	+		Rru_A3159	0.44	+1.4
3,650,685	+		Rru_A3159	0.44	+1.5
3,650,685	+		Rru_A3159	0.44	+0.0
3,650,685	+		Rru_A3159	0.44	+0.0
3,650,685	+		Rru_A3159	0.44	+0.7
3,650,686	-		Rru_A3159	0.44	-1.0
3,650,686	-		Rru_A3159	0.44	+1.2
3,650,824	+		Rru_A3159	0.55	+0.0
3,650,824	+		Rru_A3159	0.55	+0.9