Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3128

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,606,176	+		Rru_A3126	0.86	+0.4
3,606,176	+		Rru_A3126	0.86	+0.0
3,606,177	-		Rru_A3126	0.86	+0.3
3,606,178	+		Rru_A3126	0.86	+0.5
3,606,178	+		Rru_A3126	0.86	-0.7
3,606,179	-		Rru_A3126	0.86	+1.6
3,606,311	-				+0.0
3,606,311	-				+0.0
3,606,311	-				+2.0
3,606,880	+				+2.4
3,606,881	-				+0.4
3,606,881	-				-1.6
3,606,903	-				+2.0
3,607,014	+				+0.0
3,607,019	+				+0.9
3,607,019	+				+1.2
3,607,020	-				+2.0
3,607,314	+		Rru_A3128	0.34	+1.8
3,607,314	+		Rru_A3128	0.34	+1.8
3,607,315	-		Rru_A3128	0.34	+0.0
3,607,315	-		Rru_A3128	0.34	+2.1
3,607,315	-		Rru_A3128	0.34	+0.0
3,607,315	-		Rru_A3128	0.34	+1.8
3,607,480	+		Rru_A3128	0.55	+0.0
3,607,481	-		Rru_A3128	0.55	+2.0
3,607,481	-		Rru_A3128	0.55	+1.3
3,607,755	+		Rru_A3128	0.90	+0.0
3,607,833	+				+2.0
3,607,833	+				+1.7
3,607,834	-				+0.7
3,607,834	-				+1.1
3,607,940	+				-1.6
3,608,225	+		Rru_A3129	0.35	+0.7
3,608,225	+		Rru_A3129	0.35	+0.0
3,608,226	-		Rru_A3129	0.35	+3.6
3,608,236	+		Rru_A3129	0.36	+0.0
3,608,245	+		Rru_A3129	0.36	+1.4
3,608,247	+		Rru_A3129	0.36	+0.9
3,608,248	-		Rru_A3129	0.37	+1.2
3,608,248	-		Rru_A3129	0.37	+0.0
3,608,248	-		Rru_A3129	0.37	+0.6
3,608,248	-		Rru_A3129	0.37	+0.0
3,608,248	-		Rru_A3129	0.37	+1.0
3,608,262	+		Rru_A3129	0.38	+0.7
3,608,421	+		Rru_A3129	0.52	+1.0
3,608,421	+		Rru_A3129	0.52	+0.9
3,608,421	+		Rru_A3129	0.52	+0.6
3,608,421	+		Rru_A3129	0.52	+0.8
3,608,421	+		Rru_A3129	0.52	+0.7
3,608,422	-		Rru_A3129	0.52	+0.0
3,608,422	-		Rru_A3129	0.52	-1.0
3,608,422	-		Rru_A3129	0.52	+0.3
3,608,422	-		Rru_A3129	0.52	+0.9