Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3096

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,562,067	-		Rru_A3095	0.25	+0.7
3,562,366	+		Rru_A3095	0.56	+1.1
3,562,366	+		Rru_A3095	0.56	+2.0
3,562,366	+		Rru_A3095	0.56	+0.0
3,562,367	-		Rru_A3095	0.56	+0.0
3,562,367	-		Rru_A3095	0.56	+0.0
3,562,367	-		Rru_A3095	0.56	+1.4
3,562,371	+		Rru_A3095	0.56	+1.5
3,562,372	-		Rru_A3095	0.56	+1.4
3,562,408	+		Rru_A3095	0.60	+1.3
3,562,408	+		Rru_A3095	0.60	-0.4
3,562,408	+		Rru_A3095	0.60	-1.0
3,562,408	+		Rru_A3095	0.60	+0.5
3,562,408	+		Rru_A3095	0.60	+1.0
3,562,409	-		Rru_A3095	0.60	+1.2
3,562,518	+		Rru_A3095	0.71	+1.0
3,562,519	-		Rru_A3095	0.71	+0.0
3,562,826	+				+0.0
3,562,827	-				+0.8
3,562,827	-				+1.0
3,562,827	-				+1.0
3,562,827	-				+1.5
3,562,827	-				+2.1
3,562,892	+				-1.6
3,562,892	+				+0.0
3,562,892	+				+0.0
3,562,892	+				+0.0
3,562,893	-				-1.2
3,562,893	-				+1.0
3,563,040	-				+0.6
3,563,158	+				+1.2
3,563,296	+		Rru_A3096	0.18	+0.0
3,563,305	+		Rru_A3096	0.19	-1.0
3,563,482	+		Rru_A3096	0.33	+0.0
3,563,482	+		Rru_A3096	0.33	+0.7
3,563,483	-		Rru_A3096	0.33	+1.5
3,563,483	-		Rru_A3096	0.33	+0.0
3,563,489	-		Rru_A3096	0.33	+1.3
3,563,548	-		Rru_A3096	0.38	+0.0
3,563,565	+		Rru_A3096	0.39	+0.0
3,563,566	-		Rru_A3096	0.39	+1.0
3,563,585	-		Rru_A3096	0.40	-0.6
3,564,162	-		Rru_A3096	0.84	+0.0
3,564,248	-				+0.0
3,564,248	-				+0.7
3,564,503	+				+0.0
3,564,503	+				+0.0
3,564,503	+				+1.7
3,564,504	-				+1.4
3,564,504	-				+1.0
3,565,175	-		Rru_A3097	0.28	+1.0
3,565,175	-		Rru_A3097	0.28	+0.0
3,565,215	-		Rru_A3097	0.29	+0.5
3,565,215	-		Rru_A3097	0.29	+0.0
3,565,249	+		Rru_A3097	0.31	+1.4
3,565,250	-		Rru_A3097	0.31	+1.0
3,565,250	-		Rru_A3097	0.31	+0.4
3,565,250	-		Rru_A3097	0.31	+0.9
3,565,337	+		Rru_A3097	0.34	+2.3
3,565,338	-		Rru_A3097	0.34	+0.0
3,565,338	-		Rru_A3097	0.34	+2.2
3,565,338	-		Rru_A3097	0.34	+1.1
3,565,338	-		Rru_A3097	0.34	+0.2