Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3019

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,475,266	+				-0.0
3,475,266	+				+1.0
3,475,266	+				-0.0
3,475,267	-				-0.0
3,475,288	+				+1.2
3,475,597	-				+0.5
3,475,931	-				-0.0
3,475,988	+				-0.0
3,475,988	+				+1.7
3,475,989	-				+1.6
3,475,989	-				-0.0
3,475,989	-				+2.9
3,475,989	-				+0.9
3,475,990	+				+0.2
3,475,990	+				+1.3
3,475,990	+				-0.0
3,475,990	+				-0.0
3,475,991	-				+0.9
3,475,991	-				+1.0
3,475,991	-				+1.3
3,475,991	-				-0.0
3,475,991	-				+2.1
3,475,993	+				-1.6
3,475,994	-				+1.3
3,475,994	-				+1.1
3,475,994	-				-0.0
3,475,994	-				-0.0
3,475,994	-				-0.0
3,476,069	+				+1.2
3,476,069	+				-0.0
3,476,069	+				-0.0
3,476,069	+				-0.0
3,476,070	-				+0.6
3,476,070	-				+1.2
3,476,103	+				+0.6
3,476,103	+				-0.0
3,476,104	-				+1.6
3,476,225	-				-1.0
3,476,284	+		Rru_A3019	0.25	+0.5
3,476,758	-		Rru_A3020	0.45	+1.6
3,476,758	-		Rru_A3020	0.45	+0.8
3,476,849	+		Rru_A3020	0.66	+1.6
3,477,073	+				+1.2
3,477,073	+				-0.0
3,477,122	+				+1.8
3,477,122	+				+0.5
3,477,122	+				+1.2
3,477,123	-				-0.0
3,477,123	-				-0.0
3,477,167	+				-1.8
3,477,167	+				+1.2
3,477,168	-				-0.0
3,477,168	-				+1.7
3,477,168	-				-0.0
3,477,168	-				+2.9
3,477,168	-				+0.8
3,477,168	-				-0.0
3,477,168	-				+1.1
3,477,168	-				+1.7
3,477,224	+				-0.0
3,477,225	-				+1.3
3,477,327	-				-1.0
3,477,342	-				+0.3
3,477,349	+				+0.9
3,477,349	+				+1.7
3,477,350	-				-0.0
3,477,372	+				+1.3
3,477,373	-				+1.8
3,477,407	+				+0.7
3,477,408	-				+1.3
3,477,416	+				+0.8
3,477,416	+				+0.8
3,477,416	+				-0.0
3,477,417	-				+1.1
3,477,417	-				+0.8
3,477,422	+				-0.0
3,477,422	+				+1.6
3,477,432	+				+1.0
3,477,432	+				+0.7
3,477,435	+				-0.0
3,477,467	+				+1.2
3,477,467	+				-0.1