Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3009

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,465,457	+		Rru_A3007	0.87	+1.4
3,465,458	-		Rru_A3007	0.88	+1.6
3,465,458	-		Rru_A3007	0.88	+0.0
3,465,458	-		Rru_A3007	0.88	+0.0
3,465,458	-		Rru_A3007	0.88	+3.5
3,465,458	-		Rru_A3007	0.88	+1.5
3,465,458	-		Rru_A3007	0.88	+0.8
3,465,464	-		Rru_A3007	0.89	+0.0
3,465,464	-		Rru_A3007	0.89	-0.4
3,465,464	-		Rru_A3007	0.89	+1.0
3,465,530	-				+0.5
3,465,648	+		Rru_A3008	0.37	+1.4
3,465,845	+				+1.0
3,465,845	+				+0.0
3,465,845	+				-0.3
3,465,845	+				+2.9
3,465,846	-				+1.8
3,465,846	-				+0.9
3,466,115	+				+0.8
3,466,299	+				-0.0
3,466,300	-				-1.0
3,466,300	-				-0.0
3,466,304	+				-2.0
3,466,377	+		Rru_A3009	0.15	-1.6
3,466,378	-		Rru_A3009	0.15	+2.3
3,466,535	+		Rru_A3009	0.27	-0.0
3,466,596	+		Rru_A3009	0.31	-0.0
3,466,596	+		Rru_A3009	0.31	-1.0
3,466,596	+		Rru_A3009	0.31	-0.0
3,466,597	-		Rru_A3009	0.31	-0.0
3,466,646	+		Rru_A3009	0.35	+1.4
3,466,791	-		Rru_A3009	0.46	-0.3
3,466,867	-		Rru_A3009	0.52	-0.0
3,467,109	+		Rru_A3009	0.70	-1.6
3,467,218	-		Rru_A3009	0.78	-0.0
3,467,488	+				-0.0
3,467,488	+				-0.0
3,467,488	+				+0.1
3,467,488	+				-1.6
3,467,488	+				-1.0
3,467,488	+				+0.5
3,467,489	-				-0.0
3,467,489	-				-1.6
3,467,489	-				-0.0
3,467,624	+		Rru_A3010	0.13	-0.0
3,467,705	+		Rru_A3010	0.23	-0.0
3,467,705	+		Rru_A3010	0.23	-1.0
3,467,706	-		Rru_A3010	0.23	-0.0
3,467,706	-		Rru_A3010	0.23	-0.6
3,467,786	+		Rru_A3010	0.33	-0.0
3,467,801	+		Rru_A3010	0.35	-0.4
3,467,801	+		Rru_A3010	0.35	-0.0
3,467,802	-		Rru_A3010	0.35	-1.0
3,467,802	-		Rru_A3010	0.35	-1.0
3,467,802	-		Rru_A3010	0.35	-0.0
3,467,846	+		Rru_A3010	0.41	-0.0
3,467,846	+		Rru_A3010	0.41	-0.0
3,467,847	-		Rru_A3010	0.41	-0.0
3,468,119	+		Rru_A3010	0.75	-0.0
3,468,119	+		Rru_A3010	0.75	-1.6
3,468,119	+		Rru_A3010	0.75	-0.0
3,468,120	-		Rru_A3010	0.75	-1.6
3,468,120	-		Rru_A3010	0.75	-0.0
3,468,474	+				+1.3
3,468,475	-				+0.7
3,468,475	-				-0.0
3,468,475	-				+0.6
3,468,475	-				+1.8