Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3002

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,458,322	+				-0.0
3,458,326	+				+0.5
3,458,348	+				-0.0
3,458,361	+				+2.2
3,458,435	+				+2.4
3,458,435	+				-0.0
3,458,460	+				-0.0
3,458,511	+				-0.0
3,458,776	+				-0.0
3,458,899	+				-0.0
3,458,899	+				-0.6
3,458,900	-				-0.0
3,458,909	-				+2.4
3,458,910	+				+0.9
3,458,910	+				-0.0
3,458,910	+				-0.0
3,458,911	-				+2.3
3,458,911	-				-0.0
3,458,969	+				+0.9
3,459,001	+				+2.1
3,459,027	-				-0.0
3,459,560	+		Rru_A3002	0.51	+0.7
3,459,560	+		Rru_A3002	0.51	-0.6
3,459,560	+		Rru_A3002	0.51	+0.5
3,459,561	-		Rru_A3002	0.51	-0.0
3,459,561	-		Rru_A3002	0.51	-0.2
3,459,561	-		Rru_A3002	0.51	+0.9
3,459,597	+		Rru_A3002	0.57	+1.0
3,459,597	+		Rru_A3002	0.57	+0.3
3,459,597	+		Rru_A3002	0.57	-0.4
3,459,597	+		Rru_A3002	0.57	+0.7
3,459,598	-		Rru_A3002	0.57	+2.2
3,459,598	-		Rru_A3002	0.57	-0.0
3,459,598	-		Rru_A3002	0.57	-1.0
3,459,598	-		Rru_A3002	0.57	+1.0
3,459,714	+		Rru_A3002	0.76	-0.0
3,459,715	-		Rru_A3002	0.76	+0.8
3,459,912	+				+0.9
3,459,972	+				+1.9
3,460,007	+				+0.2
3,460,007	+				+1.1
3,460,007	+				+1.1
3,460,008	-				+0.0
3,460,008	-				+1.3
3,460,008	-				+1.6
3,460,008	-				+1.7
3,460,008	-				+0.0
3,460,008	-				+2.0
3,460,008	-				+0.0
3,460,008	-				+1.3
3,460,008	-				+0.0
3,460,009	+				+0.0
3,460,009	+				+0.6
3,460,009	+				+0.0
3,460,009	+				+0.6
3,460,009	+				+0.0
3,460,026	-				+1.7
3,460,150	-		Rru_A3003	0.24	+1.5
3,460,204	+		Rru_A3003	0.33	+0.0
3,460,205	-		Rru_A3003	0.33	+1.1
3,460,367	+		Rru_A3003	0.58	+1.1
3,460,367	+		Rru_A3003	0.58	+1.3
3,460,367	+		Rru_A3003	0.58	+0.0
3,460,368	-		Rru_A3003	0.58	-0.4
3,460,368	-		Rru_A3003	0.58	+0.0
3,460,424	+		Rru_A3003	0.66	+0.0
3,460,424	+		Rru_A3003	0.66	+0.9
3,460,425	-		Rru_A3003	0.67	+1.1
3,460,425	-		Rru_A3003	0.67	+1.0
3,460,602	-				+0.0
3,460,641	-				+1.2
3,460,816	+				+0.6
3,460,816	+				+0.6
3,460,816	+				+0.8
3,460,817	-				-1.0