Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3001

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,455,701	+		Rru_A3000	0.62	-0.0
3,455,701	+		Rru_A3000	0.62	+1.3
3,455,701	+		Rru_A3000	0.62	-1.6
3,455,702	-		Rru_A3000	0.62	+1.3
3,455,702	-		Rru_A3000	0.62	-0.6
3,455,705	+		Rru_A3000	0.63	-0.0
3,455,705	+		Rru_A3000	0.63	-0.0
3,455,705	+		Rru_A3000	0.63	-0.0
3,455,706	-		Rru_A3000	0.63	+0.4
3,455,773	+		Rru_A3000	0.66	-0.0
3,455,774	-		Rru_A3000	0.66	+1.3
3,455,782	+		Rru_A3000	0.66	-0.0
3,455,782	+		Rru_A3000	0.66	-0.0
3,455,783	-		Rru_A3000	0.66	-0.0
3,455,783	-		Rru_A3000	0.66	+1.0
3,455,783	-		Rru_A3000	0.66	+1.6
3,455,840	-		Rru_A3000	0.68	+2.3
3,455,840	-		Rru_A3000	0.68	+1.2
3,455,840	-		Rru_A3000	0.68	-0.0
3,455,840	-		Rru_A3000	0.68	+0.6
3,455,840	-		Rru_A3000	0.68	+0.1
3,455,986	+		Rru_A3000	0.75	+0.6
3,455,986	+		Rru_A3000	0.75	+1.2
3,455,987	-		Rru_A3000	0.75	+1.5
3,455,987	-		Rru_A3000	0.75	+1.0
3,456,004	+		Rru_A3000	0.76	-0.0
3,456,031	+		Rru_A3000	0.77	-0.0
3,456,031	+		Rru_A3000	0.77	-0.0
3,456,032	-		Rru_A3000	0.77	+0.4
3,456,032	-		Rru_A3000	0.77	-0.0
3,456,091	+		Rru_A3000	0.80	+0.7
3,456,091	+		Rru_A3000	0.80	+0.5
3,456,092	-		Rru_A3000	0.80	-0.0
3,456,172	+		Rru_A3000	0.83	+1.2
3,456,173	-		Rru_A3000	0.83	-0.0
3,456,282	-		Rru_A3000	0.88	+0.5
3,456,283	+		Rru_A3000	0.88	+1.6
3,456,283	+		Rru_A3000	0.88	+2.0
3,456,284	-		Rru_A3000	0.88	-0.0
3,456,545	+				-0.0
3,456,545	+				+1.9
3,456,562	+				+0.9
3,456,562	+				+3.9
3,456,562	+				+1.5
3,456,562	+				+1.9
3,456,563	-				+5.7
3,456,563	-				+2.5
3,456,563	-				+4.3
3,456,808	+				+1.4
3,456,809	-				+5.0
3,456,862	+		Rru_A3001	0.11	+0.7
3,456,883	+		Rru_A3001	0.12	+1.8
3,456,883	+		Rru_A3001	0.12	+3.0
3,456,884	-		Rru_A3001	0.12	+4.5
3,456,884	-		Rru_A3001	0.12	-0.0
3,456,884	-		Rru_A3001	0.12	+4.7
3,456,884	-		Rru_A3001	0.12	+3.9
3,456,913	+		Rru_A3001	0.14	+2.0
3,456,913	+		Rru_A3001	0.14	-0.4
3,456,913	+		Rru_A3001	0.14	+1.3
3,456,913	+		Rru_A3001	0.14	+1.4
3,456,913	+		Rru_A3001	0.14	-0.2
3,456,913	+		Rru_A3001	0.14	-1.0
3,456,914	-		Rru_A3001	0.14	+5.1
3,456,914	-		Rru_A3001	0.14	+5.6
3,456,914	-		Rru_A3001	0.14	+5.5
3,456,914	-		Rru_A3001	0.14	+4.7
3,456,914	-		Rru_A3001	0.14	-0.0
3,457,115	-		Rru_A3001	0.25	+5.8
3,457,115	-		Rru_A3001	0.25	+3.7
3,457,145	-		Rru_A3001	0.27	-0.0
3,457,223	-		Rru_A3001	0.31	+1.6
3,457,223	-		Rru_A3001	0.31	-0.0
3,457,405	+		Rru_A3001	0.41	-0.8
3,457,509	-		Rru_A3001	0.47	+2.5
3,457,509	-		Rru_A3001	0.47	+1.3
3,457,733	-		Rru_A3001	0.59	-0.0
3,457,786	+		Rru_A3001	0.62	+0.9
3,457,787	-		Rru_A3001	0.62	+1.1
3,457,857	-		Rru_A3001	0.66	+1.7
3,457,858	+		Rru_A3001	0.66	+0.7
3,457,858	+		Rru_A3001	0.66	-0.0
3,457,858	+		Rru_A3001	0.66	-0.0
3,457,858	+		Rru_A3001	0.66	+1.9
3,457,858	+		Rru_A3001	0.66	+0.7
3,457,858	+		Rru_A3001	0.66	-0.0
3,457,858	+		Rru_A3001	0.66	+0.6
3,457,859	-		Rru_A3001	0.66	-0.0
3,457,859	-		Rru_A3001	0.66	-0.0
3,457,859	-		Rru_A3001	0.66	-0.0
3,457,859	-		Rru_A3001	0.66	-0.0
3,457,939	+		Rru_A3001	0.70	+1.3
3,457,939	+		Rru_A3001	0.70	+0.8
3,457,940	-		Rru_A3001	0.70	-0.0
3,458,227	+		Rru_A3001	0.86	-0.0
3,458,322	+				-0.0
3,458,326	+				+0.5
3,458,348	+				-0.0
3,458,361	+				+2.2
3,458,435	+				+2.4
3,458,435	+				-0.0
3,458,460	+				-0.0
3,458,511	+				-0.0
3,458,776	+				-0.0
3,458,899	+				-0.0
3,458,899	+				-0.6
3,458,900	-				-0.0
3,458,909	-				+2.4
3,458,910	+				+0.9
3,458,910	+				-0.0
3,458,910	+				-0.0
3,458,911	-				+2.3
3,458,911	-				-0.0
3,458,969	+				+0.9
3,459,001	+				+2.1
3,459,027	-				-0.0