Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2997

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,449,005	+		Rru_A2996	0.30	+1.0
3,449,005	+		Rru_A2996	0.30	+0.8
3,449,005	+		Rru_A2996	0.30	+1.4
3,449,005	+		Rru_A2996	0.30	+0.7
3,449,005	+		Rru_A2996	0.30	-0.0
3,449,005	+		Rru_A2996	0.30	+1.1
3,449,005	+		Rru_A2996	0.30	+3.5
3,449,005	+		Rru_A2996	0.30	+1.2
3,449,005	+		Rru_A2996	0.30	-0.0
3,449,005	+		Rru_A2996	0.30	+1.0
3,449,005	+		Rru_A2996	0.30	+2.8
3,449,005	+		Rru_A2996	0.30	+1.2
3,449,006	-		Rru_A2996	0.30	+2.0
3,449,006	-		Rru_A2996	0.30	-0.0
3,449,006	-		Rru_A2996	0.30	-1.0
3,449,035	-		Rru_A2996	0.33	+0.8
3,449,267	+		Rru_A2996	0.54	+1.0
3,449,796	+				-0.4
3,449,904	-				+1.6
3,449,904	-				-0.0
3,449,904	-				+1.2
3,449,904	-				-0.0
3,449,904	-				+1.0
3,449,904	-				-1.0
3,449,906	-				+1.6
3,449,906	-				+2.9
3,449,906	-				+3.0
3,450,604	+		Rru_A2997	0.37	+0.9
3,450,604	+		Rru_A2997	0.37	+1.0
3,450,994	+		Rru_A2997	0.55	-0.0
3,450,994	+		Rru_A2997	0.55	-0.0
3,450,994	+		Rru_A2997	0.55	-0.0
3,450,994	+		Rru_A2997	0.55	+1.2
3,450,994	+		Rru_A2997	0.55	+1.3
3,450,994	+		Rru_A2997	0.55	-0.0
3,450,995	-		Rru_A2997	0.55	-0.0
3,450,995	-		Rru_A2997	0.55	+2.2
3,450,995	-		Rru_A2997	0.55	-0.0
3,451,468	+		Rru_A2997	0.77	-0.0
3,451,469	-		Rru_A2997	0.78	-0.0
3,451,469	-		Rru_A2997	0.78	-0.0
3,451,469	-		Rru_A2997	0.78	+1.0
3,451,469	-		Rru_A2997	0.78	+1.4
3,451,978	+				-0.0
3,452,016	+				+0.8
3,452,019	+				-0.0
3,452,030	+				+2.0
3,452,030	+				-0.0
3,452,040	+				-0.0
3,452,040	+				+2.6
3,452,041	-				+1.6
3,452,041	-				-1.0
3,452,041	-				-0.0
3,452,041	-				+1.0
3,452,041	-				+1.0
3,452,041	-				+1.3
3,452,044	+				+0.6
3,452,044	+				-0.0
3,452,045	-				+3.1
3,452,045	-				+0.7
3,452,051	+				+0.8
3,452,052	-				-0.0
3,452,419	-		Rru_A2998	0.23	-0.0
3,452,647	+		Rru_A2998	0.42	+1.9
3,452,647	+		Rru_A2998	0.42	+1.1
3,452,648	-		Rru_A2998	0.42	+1.1
3,452,648	-		Rru_A2998	0.42	-1.0
3,452,648	-		Rru_A2998	0.42	-0.0
3,452,849	+		Rru_A2998	0.59	+1.4
3,452,849	+		Rru_A2998	0.59	+2.2
3,452,849	+		Rru_A2998	0.59	-0.0
3,452,849	+		Rru_A2998	0.59	-0.0
3,452,849	+		Rru_A2998	0.59	+0.9
3,452,850	-		Rru_A2998	0.59	+0.7
3,452,870	+		Rru_A2998	0.60	+1.5
3,452,870	+		Rru_A2998	0.60	+1.0
3,452,870	+		Rru_A2998	0.60	+0.4
3,452,870	+		Rru_A2998	0.60	-1.0
3,452,870	+		Rru_A2998	0.60	-0.0
3,452,871	-		Rru_A2998	0.61	-0.0
3,452,871	-		Rru_A2998	0.61	+1.8
3,452,871	-		Rru_A2998	0.61	-0.0
3,452,871	-		Rru_A2998	0.61	+0.8
3,452,871	-		Rru_A2998	0.61	-0.0