Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2937
Experiment: Succinic Acid; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Succinic Acid; Light intensity 9 uM |
|---|---|---|---|---|---|
| remove | |||||
| 3,383,662 | + | Rru_A2936 | 0.41 | +0.6 | |
| 3,383,662 | + | Rru_A2936 | 0.41 | +2.6 | |
| 3,383,662 | + | Rru_A2936 | 0.41 | -0.0 | |
| 3,383,662 | + | Rru_A2936 | 0.41 | +0.3 | |
| 3,383,663 | - | Rru_A2936 | 0.41 | +1.0 | |
| 3,383,663 | - | Rru_A2936 | 0.41 | -0.0 | |
| 3,384,259 | - | Rru_A2936 | 0.85 | +0.6 | |
| 3,384,259 | - | Rru_A2936 | 0.85 | +2.7 | |
| 3,384,259 | - | Rru_A2936 | 0.85 | +0.3 | |
| 3,384,259 | - | Rru_A2936 | 0.85 | +1.5 | |
| 3,384,410 | + | -0.0 | |||
| 3,384,454 | + | +0.7 | |||
| 3,384,454 | + | -0.0 | |||
| 3,384,454 | + | -0.0 | |||
| 3,384,454 | + | -0.6 | |||
| 3,384,454 | + | -0.0 | |||
| 3,384,487 | - | -0.0 | |||
| 3,384,487 | - | +0.8 | |||
| 3,384,487 | - | -0.0 | |||
| 3,385,975 | + | Rru_A2937 | 0.80 | -0.0 | |
| 3,386,020 | + | Rru_A2937 | 0.82 | +3.1 | |
| 3,386,100 | - | Rru_A2937 | 0.87 | +1.3 |
Or see this region's nucleotide sequence