Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2888

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,331,798	+				+0.8
3,331,892	+				-0.3
3,331,893	-				-0.1
3,331,984	+				+3.2
3,332,223	+		Rru_A2887	0.30	-0.0
3,332,391	+		Rru_A2887	0.65	-0.0
3,332,391	+		Rru_A2887	0.65	+1.9
3,332,392	-		Rru_A2887	0.65	-1.0
3,332,526	+				-0.0
3,332,636	+				-0.0
3,332,697	+				+1.7
3,332,697	+				-0.0
3,332,699	+				-0.0
3,332,699	+				-0.0
3,332,699	+				+0.8
3,332,699	+				+1.0
3,332,699	+				+0.9
3,332,700	-				-0.2
3,332,712	+				+0.9
3,332,712	+				-0.0
3,332,713	-				+0.5
3,332,713	-				+1.2
3,332,794	-				-0.8
3,332,873	-		Rru_A2888	0.14	-0.0
3,332,909	-		Rru_A2888	0.19	-0.1
3,332,985	-		Rru_A2888	0.30	+1.0
3,332,985	-		Rru_A2888	0.30	+1.0
3,333,156	-		Rru_A2888	0.55	-1.6
3,333,425	-				+0.9
3,333,425	-				-0.0
3,333,433	+				-0.0
3,333,433	+				-1.2
3,333,433	+				-0.0
3,333,433	+				-1.6
3,333,434	-				-0.0
3,333,434	-				-0.0
3,333,434	-				+0.6
3,333,465	+				+0.3
3,333,466	-				+1.0
3,333,646	-		Rru_A2889	0.34	-0.6
3,333,688	+		Rru_A2889	0.42	+0.5
3,333,697	+		Rru_A2889	0.44	+2.0
3,333,698	-		Rru_A2889	0.44	+1.4
3,333,819	+		Rru_A2889	0.67	+0.9
3,333,820	-		Rru_A2889	0.68	-0.0
3,333,837	+		Rru_A2889	0.71	+0.2
3,333,838	-		Rru_A2889	0.71	-0.0
3,333,871	+		Rru_A2889	0.77	-0.0
3,333,871	+		Rru_A2889	0.77	+1.0
3,333,871	+		Rru_A2889	0.77	+1.0
3,333,872	-		Rru_A2889	0.78	-0.0
3,333,872	-		Rru_A2889	0.78	+1.4
3,333,872	-		Rru_A2889	0.78	-0.0
3,333,872	-		Rru_A2889	0.78	-0.0
3,333,875	+		Rru_A2889	0.78	+2.0
3,333,875	+		Rru_A2889	0.78	-0.0
3,333,875	+		Rru_A2889	0.78	+1.2
3,333,875	+		Rru_A2889	0.78	+1.1
3,333,875	+		Rru_A2889	0.78	+1.6
3,333,875	+		Rru_A2889	0.78	-0.0
3,333,875	+		Rru_A2889	0.78	-0.0
3,333,876	-		Rru_A2889	0.78	+0.4
3,333,876	-		Rru_A2889	0.78	+1.1
3,333,876	-		Rru_A2889	0.78	-0.1
3,333,876	-		Rru_A2889	0.78	-2.0
3,333,876	-		Rru_A2889	0.78	+3.0
3,333,876	-		Rru_A2889	0.78	+1.0
3,333,876	-		Rru_A2889	0.78	+0.2
3,333,878	-		Rru_A2889	0.79	+1.0
3,333,934	+		Rru_A2889	0.89	-0.0
3,333,935	-		Rru_A2889	0.90	+1.1
3,334,076	+				+0.8
3,334,076	+				-0.0
3,334,076	+				+3.4
3,334,124	+				+2.4
3,334,383	+		Rru_A2890	0.61	+1.0
3,334,383	+		Rru_A2890	0.61	+1.3
3,334,384	-		Rru_A2890	0.61	-0.0
3,334,384	-		Rru_A2890	0.61	+0.9
3,334,384	-		Rru_A2890	0.61	+1.9