Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2877

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,313,760	+		Rru_A2876	0.82	-0.0
3,313,896	+				+1.0
3,313,896	+				-0.0
3,313,897	-				-1.3
3,313,897	-				+0.3
3,314,186	+				+1.3
3,314,186	+				+1.7
3,314,187	-				-1.0
3,314,187	-				+1.3
3,314,187	-				-0.0
3,314,246	-				+0.7
3,314,265	+				-0.0
3,314,266	-				+1.3
3,314,266	-				+1.8
3,314,333	+				-0.0
3,314,333	+				+0.4
3,314,334	-				+1.4
3,314,334	-				-0.0
3,314,404	-				-0.0
3,314,404	-				-0.0
3,314,674	-				-0.0
3,315,189	+		Rru_A2877	0.38	+0.8
3,315,189	+		Rru_A2877	0.38	-0.0
3,315,189	+		Rru_A2877	0.38	+2.1
3,315,189	+		Rru_A2877	0.38	+2.0
3,315,190	-		Rru_A2877	0.38	+1.3
3,315,190	-		Rru_A2877	0.38	-0.4
3,315,191	+		Rru_A2877	0.38	+1.5
3,315,191	+		Rru_A2877	0.38	+1.0
3,315,191	+		Rru_A2877	0.38	-0.0
3,315,192	-		Rru_A2877	0.38	+0.1
3,315,192	-		Rru_A2877	0.38	+1.8
3,315,370	-		Rru_A2877	0.52	-0.0
3,315,381	+		Rru_A2877	0.53	-0.0
3,315,382	-		Rru_A2877	0.53	-0.0
3,315,382	-		Rru_A2877	0.53	+1.2
3,315,383	+		Rru_A2877	0.53	-0.0
3,315,544	-		Rru_A2877	0.66	+4.0
3,315,544	-		Rru_A2877	0.66	+1.4
3,315,804	-		Rru_A2877	0.86	+1.4
3,315,839	+		Rru_A2877	0.89	+0.7
3,315,839	+		Rru_A2877	0.89	+1.7
3,315,891	-				+2.2
3,315,978	+				+1.0
3,315,978	+				+0.3
3,316,334	+		Rru_A2878	0.43	+0.8
3,316,334	+		Rru_A2878	0.43	-0.0
3,316,334	+		Rru_A2878	0.43	-0.8
3,316,335	-		Rru_A2878	0.43	+0.9
3,316,335	-		Rru_A2878	0.43	+1.5
3,316,335	-		Rru_A2878	0.43	+1.4
3,316,335	-		Rru_A2878	0.43	+0.2
3,316,430	+		Rru_A2878	0.57	+1.2
3,316,430	+		Rru_A2878	0.57	-0.0
3,316,430	+		Rru_A2878	0.57	+0.4
3,316,431	-		Rru_A2878	0.58	+2.4
3,316,436	+		Rru_A2878	0.58	-0.0
3,316,436	+		Rru_A2878	0.58	+1.2
3,316,436	+		Rru_A2878	0.58	-0.0
3,316,436	+		Rru_A2878	0.58	+2.7
3,316,436	+		Rru_A2878	0.58	+1.2
3,316,437	-		Rru_A2878	0.58	-0.0
3,316,437	-		Rru_A2878	0.58	+1.3
3,316,437	-		Rru_A2878	0.58	-0.0
3,316,437	-		Rru_A2878	0.58	+3.3
3,316,451	+		Rru_A2878	0.61	+2.6
3,316,452	-		Rru_A2878	0.61	+0.9
3,316,452	-		Rru_A2878	0.61	-0.0
3,316,476	+		Rru_A2878	0.65	+1.3
3,316,494	-		Rru_A2878	0.67	+1.7
3,316,495	+		Rru_A2878	0.67	-0.0
3,316,495	+		Rru_A2878	0.67	-0.0
3,316,520	+		Rru_A2878	0.71	+1.3
3,316,520	+		Rru_A2878	0.71	+1.6
3,316,521	-		Rru_A2878	0.71	+1.0
3,316,706	+				+1.4
3,316,707	-				+1.4
3,316,707	-				+3.0