Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2871

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,306,114	+		Rru_A2870	0.41	-0.0
3,306,114	+		Rru_A2870	0.41	-0.0
3,306,114	+		Rru_A2870	0.41	-0.0
3,306,115	-		Rru_A2870	0.41	-0.6
3,306,236	+		Rru_A2870	0.49	+1.2
3,306,236	+		Rru_A2870	0.49	+0.3
3,306,237	-		Rru_A2870	0.49	-0.0
3,306,765	+		Rru_A2870	0.82	+1.3
3,306,765	+		Rru_A2870	0.82	+0.2
3,306,765	+		Rru_A2870	0.82	+0.9
3,306,765	+		Rru_A2870	0.82	-0.0
3,306,766	-		Rru_A2870	0.82	-0.0
3,306,876	+		Rru_A2870	0.89	+1.4
3,306,876	+		Rru_A2870	0.89	-0.0
3,306,876	+		Rru_A2870	0.89	-0.0
3,306,876	+		Rru_A2870	0.89	-0.0
3,306,877	-		Rru_A2870	0.90	+1.6
3,306,877	-		Rru_A2870	0.90	+1.0
3,306,894	+				-0.7
3,307,039	-				-0.0
3,307,107	+				+1.0
3,307,107	+				+0.8
3,307,107	+				-0.0
3,307,108	-				-0.0
3,307,108	-				-0.0
3,307,108	-				-0.0
3,307,118	+				+1.9
3,307,118	+				+1.2
3,307,203	+		Rru_A2871	0.11	-0.0
3,307,203	+		Rru_A2871	0.11	+1.3
3,307,203	+		Rru_A2871	0.11	+0.4
3,307,203	+		Rru_A2871	0.11	-0.0
3,307,203	+		Rru_A2871	0.11	-0.0
3,307,203	+		Rru_A2871	0.11	+0.5
3,307,203	+		Rru_A2871	0.11	+1.5
3,307,204	-		Rru_A2871	0.11	+0.3
3,307,204	-		Rru_A2871	0.11	+2.4
3,307,761	+		Rru_A2871	0.59	+0.7
3,307,761	+		Rru_A2871	0.59	+0.1
3,307,761	+		Rru_A2871	0.59	-0.5
3,307,762	-		Rru_A2871	0.59	+0.8
3,307,762	-		Rru_A2871	0.59	+0.8
3,308,200	+				+2.0
3,308,420	+		Rru_A2872	0.36	+2.6
3,308,421	-		Rru_A2872	0.36	-0.0
3,308,421	-		Rru_A2872	0.36	+1.0
3,308,421	-		Rru_A2872	0.36	+0.6
3,308,421	-		Rru_A2872	0.36	+1.6
3,308,432	+		Rru_A2872	0.39	+1.1
3,308,701	+				+2.0
3,308,701	+				+0.4
3,308,701	+				+1.1
3,308,702	-				-0.0
3,308,702	-				-0.0
3,308,721	+				-0.0
3,308,721	+				+0.4
3,308,721	+				+1.3
3,308,721	+				-0.0
3,308,722	-				-0.0
3,309,022	-		Rru_A2873	0.19	-0.0
3,309,069	+		Rru_A2873	0.23	+1.0
3,309,069	+		Rru_A2873	0.23	+0.9
3,309,070	-		Rru_A2873	0.23	+2.6
3,309,070	-		Rru_A2873	0.23	+0.9
3,309,070	-		Rru_A2873	0.23	-0.0
3,309,180	+		Rru_A2873	0.33	-0.0
3,309,180	+		Rru_A2873	0.33	+0.8
3,309,181	-		Rru_A2873	0.33	+2.2
3,309,181	-		Rru_A2873	0.33	+1.3
3,309,181	-		Rru_A2873	0.33	+0.4
3,309,199	-		Rru_A2873	0.34	-1.0