Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2865

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,297,450	+				+0.4
3,297,450	+				+1.1
3,297,450	+				+0.7
3,297,451	-				-0.0
3,297,451	-				-0.0
3,297,475	-				+2.2
3,297,584	+		Rru_A2864	0.19	+1.3
3,297,584	+		Rru_A2864	0.19	-0.0
3,297,584	+		Rru_A2864	0.19	-0.0
3,297,626	+		Rru_A2864	0.24	+0.7
3,297,626	+		Rru_A2864	0.24	+0.3
3,297,627	-		Rru_A2864	0.24	-0.0
3,297,627	-		Rru_A2864	0.24	-0.0
3,297,936	+		Rru_A2864	0.62	-0.0
3,297,936	+		Rru_A2864	0.62	-1.0
3,297,936	+		Rru_A2864	0.62	+0.9
3,297,936	+		Rru_A2864	0.62	+3.3
3,297,936	+		Rru_A2864	0.62	+2.6
3,297,936	+		Rru_A2864	0.62	-0.0
3,297,936	+		Rru_A2864	0.62	+0.4
3,297,936	+		Rru_A2864	0.62	+0.9
3,297,936	+		Rru_A2864	0.62	+0.8
3,297,936	+		Rru_A2864	0.62	-0.0
3,297,936	+		Rru_A2864	0.62	-2.0
3,297,936	+		Rru_A2864	0.62	+1.8
3,297,937	-		Rru_A2864	0.62	+2.3
3,297,937	-		Rru_A2864	0.62	+0.7
3,297,937	-		Rru_A2864	0.62	+1.0
3,297,937	-		Rru_A2864	0.62	+0.8
3,297,937	-		Rru_A2864	0.62	-0.0
3,297,941	+		Rru_A2864	0.63	-0.0
3,297,942	-		Rru_A2864	0.63	+0.4
3,298,189	-				+2.2
3,298,199	+				-0.0
3,298,199	+				+0.8
3,298,199	+				-0.0
3,298,199	+				-0.0
3,298,200	-				-0.0
3,298,356	-				-0.3
3,298,420	+				-0.0
3,298,421	-				-0.0
3,298,424	+				-1.0
3,298,425	-				-0.0
3,298,708	+		Rru_A2865	0.20	-0.0
3,298,708	+		Rru_A2865	0.20	-0.0
3,298,708	+		Rru_A2865	0.20	-2.8
3,298,708	+		Rru_A2865	0.20	+1.0
3,298,709	-		Rru_A2865	0.20	-0.0
3,298,709	-		Rru_A2865	0.20	-0.0
3,298,921	+		Rru_A2865	0.31	-0.6
3,299,168	+		Rru_A2865	0.43	+0.3
3,299,169	-		Rru_A2865	0.43	-0.6
3,299,455	+		Rru_A2865	0.57	-0.0
3,299,455	+		Rru_A2865	0.57	-0.0
3,299,455	+		Rru_A2865	0.57	-0.0
3,299,455	+		Rru_A2865	0.57	-0.0
3,299,455	+		Rru_A2865	0.57	-0.0
3,299,455	+		Rru_A2865	0.57	+1.3
3,299,456	-		Rru_A2865	0.57	-1.0
3,299,611	+		Rru_A2865	0.65	-0.8
3,299,774	-		Rru_A2865	0.73	-0.4
3,299,774	-		Rru_A2865	0.73	+0.7
3,299,889	-		Rru_A2865	0.78	-0.0
3,300,339	+				-1.0
3,300,339	+				-0.0
3,300,340	-				+0.4
3,300,340	-				-0.0
3,300,340	-				-0.4
3,300,340	-				-0.0
3,300,347	-				-0.0
3,300,361	+				+0.8
3,300,362	-				+1.5
3,300,503	+				-0.0
3,300,503	+				-0.0
3,300,504	-				-0.0
3,300,504	-				-0.0
3,300,504	-				-0.0
3,300,504	-				-0.0
3,300,627	-		Rru_A2866	0.21	+1.4
3,300,646	+		Rru_A2866	0.24	-0.0
3,300,647	-		Rru_A2866	0.24	-0.0
3,300,647	-		Rru_A2866	0.24	-0.0
3,300,647	-		Rru_A2866	0.24	-0.0
3,300,647	-		Rru_A2866	0.24	+1.4
3,300,705	-		Rru_A2866	0.30	+0.1
3,300,848	+		Rru_A2866	0.46	-1.0
3,300,849	-		Rru_A2866	0.46	-0.0
3,300,849	-		Rru_A2866	0.46	-1.0
3,301,158	-		Rru_A2866	0.81	-0.0
3,301,158	-		Rru_A2866	0.81	+2.4