Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2827

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,258,710	-		Rru_A2825	0.18	+2.7
3,258,710	-		Rru_A2825	0.18	+1.2
3,258,731	+		Rru_A2825	0.23	-1.6
3,258,732	-		Rru_A2825	0.23	+0.8
3,258,732	-		Rru_A2825	0.23	+1.2
3,258,732	-		Rru_A2825	0.23	+0.9
3,258,732	-		Rru_A2825	0.23	-0.0
3,258,775	+		Rru_A2825	0.34	+2.2
3,258,775	+		Rru_A2825	0.34	-0.3
3,258,775	+		Rru_A2825	0.34	+1.2
3,258,776	-		Rru_A2825	0.34	+2.1
3,258,776	-		Rru_A2825	0.34	+1.6
3,258,776	-		Rru_A2825	0.34	-0.7
3,258,776	-		Rru_A2825	0.34	+0.5
3,258,811	+		Rru_A2825	0.42	-0.0
3,258,833	+		Rru_A2825	0.48	-1.0
3,258,833	+		Rru_A2825	0.48	+0.6
3,258,833	+		Rru_A2825	0.48	-2.8
3,258,833	+		Rru_A2825	0.48	+1.6
3,258,833	+		Rru_A2825	0.48	+0.9
3,258,834	-		Rru_A2825	0.48	+1.5
3,258,834	-		Rru_A2825	0.48	+1.0
3,258,834	-		Rru_A2825	0.48	+2.0
3,259,085	-				+1.3
3,259,130	+		Rru_A2826	0.10	-1.0
3,259,130	+		Rru_A2826	0.10	+1.2
3,259,153	+		Rru_A2826	0.15	-0.0
3,259,153	+		Rru_A2826	0.15	+1.4
3,259,154	-		Rru_A2826	0.15	-0.0
3,259,154	-		Rru_A2826	0.15	+3.6
3,259,154	-		Rru_A2826	0.15	+1.2
3,259,154	-		Rru_A2826	0.15	-0.0
3,259,154	-		Rru_A2826	0.15	+0.7
3,259,229	-		Rru_A2826	0.32	+1.4
3,259,255	+		Rru_A2826	0.37	+1.0
3,259,284	+		Rru_A2826	0.44	+0.7
3,259,284	+		Rru_A2826	0.44	+0.7
3,259,285	-		Rru_A2826	0.44	+0.3
3,259,285	-		Rru_A2826	0.44	-0.0
3,259,378	+		Rru_A2826	0.64	-0.0
3,259,378	+		Rru_A2826	0.64	-0.0
3,259,382	+		Rru_A2826	0.65	-0.0
3,259,383	-		Rru_A2826	0.65	+1.0
3,259,383	-		Rru_A2826	0.65	+0.4
3,259,404	-		Rru_A2826	0.70	+1.6
3,259,404	-		Rru_A2826	0.70	+1.6
3,259,467	+		Rru_A2826	0.84	-0.0
3,259,566	+				-0.0
3,259,567	-				+0.8
3,259,575	+				+0.9
3,259,583	+				+1.0
3,259,583	+				-0.0
3,259,583	+				-0.0
3,259,583	+				-1.0
3,259,584	-				+0.9
3,259,584	-				-0.0
3,259,584	-				-0.0
3,259,584	-				+1.3
3,259,593	+				+2.2
3,259,593	+				+1.6
3,259,593	+				+3.0
3,259,594	-				+0.6
3,259,643	+				+1.2
3,259,670	+				-0.0
3,259,670	+				+3.0
3,259,670	+				-0.0
3,259,670	+				+1.7
3,259,670	+				+1.6
3,259,671	-				-0.0
3,259,671	-				+1.4
3,259,671	-				-0.0
3,259,673	+				+1.0
3,259,673	+				-0.0
3,259,673	+				+0.6
3,259,673	+				-0.0
3,259,673	+				+1.8
3,259,673	+				-0.0
3,259,673	+				+0.7
3,259,673	+				+0.6
3,259,806	+		Rru_A2827	0.27	-0.3
3,259,807	-		Rru_A2827	0.27	+1.9
3,259,807	-		Rru_A2827	0.27	+0.7
3,259,807	-		Rru_A2827	0.27	-0.0
3,259,807	-		Rru_A2827	0.27	+1.4
3,259,807	-		Rru_A2827	0.27	+0.7
3,259,807	-		Rru_A2827	0.27	-0.0
3,260,007	+		Rru_A2827	0.81	+1.1
3,260,007	+		Rru_A2827	0.81	-0.0
3,260,007	+		Rru_A2827	0.81	+2.1
3,260,007	+		Rru_A2827	0.81	-0.0
3,260,008	-		Rru_A2827	0.81	+2.8
3,260,008	-		Rru_A2827	0.81	+1.8
3,260,008	-		Rru_A2827	0.81	-0.0
3,260,008	-		Rru_A2827	0.81	+0.9
3,260,008	-		Rru_A2827	0.81	+1.3
3,260,013	+		Rru_A2827	0.82	-0.0
3,260,014	-		Rru_A2827	0.83	+1.8
3,260,491	+		Rru_A2828	0.76	-0.0
3,260,491	+		Rru_A2828	0.76	+1.2
3,260,492	-		Rru_A2828	0.77	+1.3
3,260,492	-		Rru_A2828	0.77	+0.8
3,260,492	-		Rru_A2828	0.77	+1.1
3,260,620	+				+1.0
3,260,620	+				+1.0
3,260,621	-				-0.7
3,260,630	+				-0.0
3,260,630	+				-0.0
3,260,630	+				+1.2
3,260,630	+				-1.6
3,260,687	+		Rru_A2829	0.17	-1.0