Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2823

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,256,979	+				-0.0
3,256,980	-				+0.5
3,257,041	-				+0.5
3,257,175	+		Rru_A2822	0.25	-0.6
3,257,175	+		Rru_A2822	0.25	-0.0
3,257,175	+		Rru_A2822	0.25	+1.2
3,257,175	+		Rru_A2822	0.25	+1.0
3,257,176	-		Rru_A2822	0.25	-1.0
3,257,176	-		Rru_A2822	0.25	+1.6
3,257,176	-		Rru_A2822	0.25	+0.8
3,257,176	-		Rru_A2822	0.25	-0.3
3,257,176	-		Rru_A2822	0.25	+0.2
3,257,251	+		Rru_A2822	0.35	+0.5
3,257,252	-		Rru_A2822	0.35	+1.5
3,257,252	-		Rru_A2822	0.35	+1.1
3,257,293	-		Rru_A2822	0.40	-0.0
3,257,293	-		Rru_A2822	0.40	+0.2
3,257,452	+		Rru_A2822	0.61	+2.0
3,257,452	+		Rru_A2822	0.61	+0.6
3,257,453	-		Rru_A2822	0.61	+1.2
3,257,453	-		Rru_A2822	0.61	+3.4
3,257,608	+		Rru_A2822	0.81	+0.7
3,257,649	+		Rru_A2822	0.87	-0.0
3,257,649	+		Rru_A2822	0.87	+1.0
3,257,650	-		Rru_A2822	0.87	+0.7
3,257,650	-		Rru_A2822	0.87	-0.0
3,257,650	-		Rru_A2822	0.87	+0.1
3,257,764	+				+1.4
3,257,765	-				+0.9
3,257,765	-				+0.6
3,257,830	-				+1.7
3,257,927	+				+1.0
3,258,296	+				+1.2
3,258,552	+		Rru_A2824	0.88	-0.0
3,258,552	+		Rru_A2824	0.88	-0.0
3,258,552	+		Rru_A2824	0.88	+1.4
3,258,552	+		Rru_A2824	0.88	+1.1
3,258,553	-		Rru_A2824	0.89	-1.0
3,258,553	-		Rru_A2824	0.89	-0.0
3,258,553	-		Rru_A2824	0.89	+0.9
3,258,553	-		Rru_A2824	0.89	-0.6
3,258,554	+		Rru_A2824	0.89	+0.5
3,258,555	-		Rru_A2824	0.89	-0.0
3,258,555	-		Rru_A2824	0.89	-0.0
3,258,555	-		Rru_A2824	0.89	+1.1
3,258,555	-		Rru_A2824	0.89	+0.9
3,258,710	-		Rru_A2825	0.18	+2.7
3,258,710	-		Rru_A2825	0.18	+1.2
3,258,731	+		Rru_A2825	0.23	-1.6
3,258,732	-		Rru_A2825	0.23	+0.8
3,258,732	-		Rru_A2825	0.23	+1.2
3,258,732	-		Rru_A2825	0.23	+0.9
3,258,732	-		Rru_A2825	0.23	-0.0
3,258,775	+		Rru_A2825	0.34	+2.2
3,258,775	+		Rru_A2825	0.34	-0.3
3,258,775	+		Rru_A2825	0.34	+1.2
3,258,776	-		Rru_A2825	0.34	+2.1
3,258,776	-		Rru_A2825	0.34	+1.6
3,258,776	-		Rru_A2825	0.34	-0.7
3,258,776	-		Rru_A2825	0.34	+0.5
3,258,811	+		Rru_A2825	0.42	-0.0
3,258,833	+		Rru_A2825	0.48	-1.0
3,258,833	+		Rru_A2825	0.48	+0.6
3,258,833	+		Rru_A2825	0.48	-2.8
3,258,833	+		Rru_A2825	0.48	+1.6
3,258,833	+		Rru_A2825	0.48	+0.9
3,258,834	-		Rru_A2825	0.48	+1.5
3,258,834	-		Rru_A2825	0.48	+1.0
3,258,834	-		Rru_A2825	0.48	+2.0
3,259,085	-				+1.3
3,259,130	+		Rru_A2826	0.10	-1.0
3,259,130	+		Rru_A2826	0.10	+1.2
3,259,153	+		Rru_A2826	0.15	-0.0
3,259,153	+		Rru_A2826	0.15	+1.4
3,259,154	-		Rru_A2826	0.15	-0.0
3,259,154	-		Rru_A2826	0.15	+3.6
3,259,154	-		Rru_A2826	0.15	+1.2
3,259,154	-		Rru_A2826	0.15	-0.0
3,259,154	-		Rru_A2826	0.15	+0.7